Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3835 ATGGTGAGGCGCACTCGATCCCAAACCAAAGCCATTTCCAGTCCTGAGCTTCAATATCAAGATTCTCAGTCTCCAACCACAAGTGCTATATCCTTAAACCCTTCCTCTTCCAAAATCTCATTTCGGGCTCGAAAAATCCGAAGAATCACTTCCGATGGCGATGACATCAAACGCCCCCAGATTGCCAACGCAAAAGCATCCGAAACTTCGACACTCTCGGAAGACAAAGCCTTCACATCCGAGAAGGAAACGCTATGCGCATCACCCTCCGTTTTGCCATTGATCGGTAAGCCATTGACGCTGAAAGGCGAAATCGATCTTGCTCTTCAGCATTTACGATTGGCCGATTCTCTCTTGGTGTCTTGTATTGATTCTTTTCGCCCTCCGGAGTTCCCTTCTCACCGCCCGCCATTCCTATCCCTCACAAAGAGCATTGTTTGCCAGCAACTATCTAACCAAGCGGCCAAAACGATCCACACTCGTTTCGTCACACTCTGTGGAGGCGACGATTCAGTTCGGCCAGACATAGTGCTTGGGCTCTCAGCTCAGCAGCTTCGGGAAGTTGGAATCTCTGGACAGAAAGCAAGTTACCTACATGATCTATCAAGTAAATACAGAGATGGGGTATTATCAGATTCTTCAGTGCTTGAAATGGATGATGAAACCCTCTTTAGTAAACTCACAATGGTTAAGGGAATTGGACCTTGGTCAGTGCACATGTTCATGATGTTCACGCTTCATAGGCCTGACGTTCTCCCTGTGGGGGATCTAGTTGTTAGGAGAGGTGTGGAGCGATTGTATGGCCTAAAAGCATTACCTCAGCCTTCACAAATGGAGAAGTTATGTGAGAAGTGGAAGCCCTATAGGTCTGTTGGGTCTTGGTATATGTATAGGCTCATGGAAGCAAAGGGGGTCTTGCCAACATAG 927 0.4746 MVRRTRSQTKAISSPELQYQDSQSPTTSAISLNPSSSKISFRARKIRRITSDGDDIKRPQIANAKASETSTLSEDKAFTSEKETLCASPSVLPLIGKPLTLKGEIDLALQHLRLADSLLVSCIDSFRPPEFPSHRPPFLSLTKSIVCQQLSNQAAKTIHTRFVTLCGGDDSVRPDIVLGLSAQQLREVGISGQKASYLHDLSSKYRDGVLSDSSVLEMDDETLFSKLTMVKGIGPWSVHMFMMFTLHRPDVLPVGDLVVRRGVERLYGLKALPQPSQMEKLCEKWKPYRSVGSWYMYRLMEAKGVLPT 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3835 308 Gene3D Hypothetical protein; domain 2 135 248 - -
Sto6g3835 308 PANTHER HHH-GPD BASE EXCISION DNA REPAIR FAMILY PROTEIN 18 306 - -
Sto6g3835 308 SMART endo3end 146 301 IPR003265 GO:0006284
Sto6g3835 308 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 18 306 - -
Sto6g3835 308 SUPERFAMILY DNA-glycosylase 126 299 IPR011257 GO:0003824|GO:0006281
Sto6g3835 308 MobiDBLite consensus disorder prediction 52 74 - -
Sto6g3835 308 Pfam HhH-GPD superfamily base excision DNA repair protein 143 286 IPR003265 GO:0006284
Sto6g3835 308 MobiDBLite consensus disorder prediction 1 38 - -
Sto6g3835 308 CDD ENDO3c 138 299 IPR003265 GO:0006284
Sto6g3835 308 Gene3D - 110 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3835 Sto-Chr6 42878584 42879510 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3835 K01247 - jre:109005513 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0228 5 1333250 1334431 Sto6g3835 6 42878584 42879510 ECH
Sto6g3835 6 42878584 42879510 Sto6g3835 6 42878584 42879510 ECH