Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0228 ATGGGCGAGCAAACTCAAGGTCAAGGACAGACCCAAACCCGAACCCAGAATCAGCCACAGCCTAACCAGGATTCTTCTAGCACCTCCGTTACCACCACCGATTCAACTACCGCAACTACGGCCACCGTGGCCACCGCTACCATTGCTCAGGTTACGCTAACAGAGTCCGAACTAAGTAATGTTCCTTCGCAAACCTATTCTCCGCCTTCCAAAATCCCCTCGCGGCCCAGAAAGATCAGGAAGCTCTCCCCGGACCCCAATAACTCTCAAATCGTCGTCGTGGAAAACCCGAAACCTACCACGACAGTCGCCTCCACCTCCAAGACGACTGGTCGGACAAACAAGAATGTTCAACAACGAGCCCAAATGATTCCCAGAATGGTCGCGAGGTCATTATCGTGTGAAGGCGAGGTCGAGATCGCTCTGCGCTACCTCCGAAACGCTGATCCACTCCTTGCTCCTTTAATTGACATTCACCAACCCCCTACCTTCGATAATTTCCATACTCCATTTCTGGCTCTAACGCGTAGCATTCTGTATCAGCAACTTGCTTATAAAGCTGGTACTTCAATCTATACCCGCTTCATTGCTCTGTGTGGCGGAGAGGCTGGTGTTCTTCCAGAAACAGTTCTTGCCCTAACTCCCCAACAGCTTCGCCAGATTGGTGTTTCCGGACGAAAAGCTAGTTATCTTCATGATTTGGCCAGGAAATACCAGAACGGGATATTATCAGATTCAGCCATTGTAAATATGGATGATAAATCACTTTTTACGATGCTCACAATGGTTAATGGGATTGGATCTTGGTCTGTTCATATGTTCATGATTTTCTCTCTCCACAGACCTGATGTTCTTCCAATTAACGATCTCGGTGTTCGCAAGGGGGTTCAGCTCCTTTACAACCTCGAAGAGCTGCCACGACCATCTCAGATGGACCAATTGTGCGATAAATGGAGGCCTTACCGGTCTGTTGCTTCGTGGTATATGTGGAGATTTGTTGAAGCTAAGGGAACTCCTTCAAGTGCGGTGGCCGTGGCTACTGGGGCCAGcttgcagcagcagcagcaacacCAGCAGGAGCAGCAACAGCCACAGCACCCCTCGCAACCACAGCTTCTGGATCCCATAAATAGCATGTTTAACCTTGGGTAA 1152 0.4852 MGEQTQGQGQTQTRTQNQPQPNQDSSSTSVTTTDSTTATTATVATATIAQVTLTESELSNVPSQTYSPPSKIPSRPRKIRKLSPDPNNSQIVVVENPKPTTTVASTSKTTGRTNKNVQQRAQMIPRMVARSLSCEGEVEIALRYLRNADPLLAPLIDIHQPPTFDNFHTPFLALTRSILYQQLAYKAGTSIYTRFIALCGGEAGVLPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYNLEELPRPSQMDQLCDKWRPYRSVASWYMWRFVEAKGTPSSAVAVATGASLQQQQQHQQEQQQPQHPSQPQLLDPINSMFNLG 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0228 383 SMART endo3end 179 334 IPR003265 GO:0006284
Sto5g0228 383 Gene3D Hypothetical protein; domain 2 168 281 - -
Sto5g0228 383 MobiDBLite consensus disorder prediction 1 42 - -
Sto5g0228 383 MobiDBLite consensus disorder prediction 57 71 - -
Sto5g0228 383 Pfam HhH-GPD superfamily base excision DNA repair protein 176 318 IPR003265 GO:0006284
Sto5g0228 383 MobiDBLite consensus disorder prediction 347 383 - -
Sto5g0228 383 SUPERFAMILY DNA-glycosylase 160 332 IPR011257 GO:0003824|GO:0006281
Sto5g0228 383 PANTHER BNAC05G15000D PROTEIN 1 383 - -
Sto5g0228 383 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 1 383 - -
Sto5g0228 383 MobiDBLite consensus disorder prediction 57 90 - -
Sto5g0228 383 CDD ENDO3c 171 332 IPR003265 GO:0006284
Sto5g0228 383 Gene3D - 144 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0228 Sto-Chr5 1333250 1334431 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0228 K01247 - gmx:100790760 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0228 5 1333250 1334431 Sto6g3835 6 42878584 42879510 ECH
Sto5g0228 5 1333250 1334431 Sto5g0228 5 1333250 1334431 ECH