Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3785 ATGAGGTACTCACTCCTCGCCGGCGGGAAGCGCGTGCGTCCAATCCTCTGCATCGCCGCGTGCGAGCTTGTTGGCGGCCGGGAAGAGACGGCCATGCCAGCTGCTTGCGCCGTCGAGATGATCCACACCATGTCACTGATTCACGATGACCTGCCTTGTATGGACAACGACGATCTCCGGCGAGGAAAACCCACGAACCACAAGGTCTTCGGCGAGGATGTGGCGGTTCTAGCAGGGGATGCTCTGCTTGCTTTCTCCTTCGAGCACGTGGCTGTTTCTACGGTGGGTGTATCGCCGACGAGGATAATACGCGCAGTTGCTGAGTTAGCGAAATCGATTGGGGCGGAAGGGGTGGTTGCCGGGCAAGTGGTGGACATAGATTCGGAAGGATTATCCGATGTGGGACTGGAGAAGCTGGAGTTCATTCATCTTCACAAAACGGCTGCGTTGCTGGAAGGTGCGGTTGTGTTGGGAGCAATAATGGGAGGCGGGTCGGACGAGGAGATTGAGAAATTAAGGAAGTTCGCGAGGTGTATTGGGCTCTTGTTTCAGGTCGTGGATGATATTCTTGATGTCACAAAATCGTCAGAGGAATTGGGGAAGACAGCGGGGAAGGACTTGGTGGCTGATAAGGTTACGTATCCCAAACTTGTAGGGATTGAGAAATCGAGGGAGTTTGctcgaaagttgaataaggatGCTCGTGATCAGCTCGCTGGGTTTGATCCGGACAAAGCAGCTCCATTGATTGCTTTGGCTAATTACATTGCTTATAGGGAAAATTAG 786 0.5216 MRYSLLAGGKRVRPILCIAACELVGGREETAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFSFEHVAVSTVGVSPTRIIRAVAELAKSIGAEGVVAGQVVDIDSEGLSDVGLEKLEFIHLHKTAALLEGAVVLGAIMGGGSDEEIEKLRKFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVADKVTYPKLVGIEKSREFARKLNKDARDQLAGFDPDKAAPLIALANYIAYREN 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3785 261 ProSitePatterns Polyprenyl synthases signature 1. 46 62 IPR033749 -
Sto6g3785 261 ProSitePatterns Polyprenyl synthases signature 2. 179 191 IPR033749 -
Sto6g3785 261 SUPERFAMILY Terpenoid synthases 1 248 IPR008949 -
Sto6g3785 261 CDD Trans_IPPS_HT 1 259 IPR000092 GO:0008299
Sto6g3785 261 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE, CHLOROPLASTIC 1 261 - -
Sto6g3785 261 Pfam Polyprenyl synthetase 2 230 IPR000092 GO:0008299
Sto6g3785 261 SFLD Isoprenoid Synthase Type I 1 259 - -
Sto6g3785 261 Gene3D Farnesyl Diphosphate Synthase 1 261 IPR008949 -
Sto6g3785 261 SFLD Polyprenyl Transferase Like 1 259 - -
Sto6g3785 261 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 1 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3785 Sto-Chr6 42533619 42534404 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3785 K13789 - zju:107424859 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3785 6 42533619 42534404 Sto11g1572 11 14849180 14850307 CCT
Sto6g3785 6 42533619 42534404 Sto6g3785 6 42533619 42534404 ECH
Sto6g3785 6 42533619 42534404 Sto11g1572 11 14849180 14850307 ECH