Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1572 ATGAGTTCTGTGAATCTTGGTTCATGGGCTCGTCCCAGTTCTATGCTCAATCAGGTGAACAGATCCAGATCCCCAACTTTTGCCCTCTTCAATGGCCTTAGAAAATCTCCCATTTCCTTCATTACCCCTAAATCACGAACCCATccaatctcttcttcttcttccgtcTCGGAAAACGCCGTCGCAGATTCAGAGGAAGAAGACAAACCCACCTTCAATTTCAAAGCGTACATGCTTGAGAAGGCTAATAAGGTAAATCAAGCGCTGGATGCTGCCGTTGCTCTGCGGGAACCCGAGAAGATCCACGAGGCCATGCGGTATTCGCTTCTCGCCGGAGGGAAGCGCGTGCGCCCAGTGCTCTGTATCGCCGCGTGCGAGCTCGTTGGGGGAAACGAAGCAATGGCTATGCCGTCGGCTTGCGCCGTCGAGATGATCCACACCATGTCGCTGATTCACGACGATTTGCCCTGTATGGATAACGACGATCTCCGGCGAGGAAAACCGACGAATCACAAGGTTTTCGGCGAGGAGGTGGCGGTTCTCGCCGGCGATGCCCTTCTGTCTTTCGCATTCGAGCACATAGCCGTTTCGACGGCGGGCGTCTCCCCGGCGAGGATAGTTCGCGCCATCGGAGAGCTAGCGAAGTCGATTGGCTCCGAAGGGCTCGTGGCCGGACAAGTGGTGGATATAAATTCGGAAGGATTGTCCGATGTGGGAGTTGAGAGACTGGAATTCATTCATCTGCACAAAACGGCGGCGTTGCTGGAAGCGGCGGTGGTGCTGGGAGCAATCATGGGAGGTGGGTCGGACGAGGAGGTGGAGAAATTGAGGAAATTCGCGAGGTACATCGGATTGCTGTTTCAGGTTGTGGATGACATTCTTGATGTGACCAAGTCGTCGCAGGAATTGGGGAAAACCGCAGGGAAGGACTTGGTGGCTGATAAGGTCACATATCCTAAACTTTTAGGGATAGAGAAATCTAGGGAATTTGCTGAGAAATTGAACAATGACGCGAGAGAGCAGCTTTCTGGTTTTGATCCTGAAAAAGCTGCTCCTTTATATGCTCTAGCAAATTACATTGCGTACAGGCAGAATTAG 1098 0.5109 MSSVNLGSWARPSSMLNQVNRSRSPTFALFNGLRKSPISFITPKSRTHPISSSSSVSENAVADSEEEDKPTFNFKAYMLEKANKVNQALDAAVALREPEKIHEAMRYSLLAGGKRVRPVLCIAACELVGGNEAMAMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEEVAVLAGDALLSFAFEHIAVSTAGVSPARIVRAIGELAKSIGSEGLVAGQVVDINSEGLSDVGVERLEFIHLHKTAALLEAAVVLGAIMGGGSDEEVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSREFAEKLNNDAREQLSGFDPEKAAPLYALANYIAYRQN 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1572 365 MobiDBLite consensus disorder prediction 44 65 - -
Sto11g1572 365 MobiDBLite consensus disorder prediction 44 60 - -
Sto11g1572 365 Pfam Polyprenyl synthetase 99 335 IPR000092 GO:0008299
Sto11g1572 365 ProSitePatterns Polyprenyl synthases signature 1. 150 166 IPR033749 -
Sto11g1572 365 CDD Trans_IPPS_HT 97 363 IPR000092 GO:0008299
Sto11g1572 365 Gene3D Farnesyl Diphosphate Synthase 66 365 IPR008949 -
Sto11g1572 365 SFLD Isoprenoid Synthase Type I 76 363 - -
Sto11g1572 365 ProSitePatterns Polyprenyl synthases signature 2. 283 295 IPR033749 -
Sto11g1572 365 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE, CHLOROPLASTIC-LIKE 1 365 - -
Sto11g1572 365 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 1 365 - -
Sto11g1572 365 SUPERFAMILY Terpenoid synthases 75 346 IPR008949 -
Sto11g1572 365 SFLD Polyprenyl Transferase Like 76 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1572 Sto-Chr11 14849180 14850307 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1572 K13789 - jre:108995354 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3785 6 42533619 42534404 Sto11g1572 11 14849180 14850307 CCT
Sto11g1572 11 14849180 14850307 Sto11g1572 11 14849180 14850307 ECH
Sto6g3785 6 42533619 42534404 Sto11g1572 11 14849180 14850307 ECH