Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3502 ATGAAAACAAGGAGAGGAAAACGCTCAGAGGCCTTTTGGCCTTCCCTTGTTATGAAGAAATGGTTAAATATAAAGCCTAAGGTGTATGATTTCAGCGAAGATGAGGTGGATACTGAAACTGAGAGTGAAGATGACGATATTCCTTCTAAGGCCTATAAGACAAGACACAGAAGGGGGAAATCAGAAACTTTGCGCGCTCAGTACATAAACACAAAGGAAGTAAGGGTAACAGTTAGCACTTGGAATGTTGCCGGTAGAGTTCCATGTGAGGATCTTGAGATTGATGACTGGCTTTGTACTGATGAGCCTGCTGATATATACATTATTGGTTTCCAAGAGGTAGTCCCATTGAATGCTGGAAATGTACTGGGAGCAGAAGATAACACACCCATCCCAAAGTGGGAATCAATCATTAGAAGAACTCTAAACAAATCTTCTGAAACAGAAAGCAAGCACAAAAGCTATAGTGCTCCTCCTTCTCCAGTGTTAAGAACTTCTTCTGCAGCTGACATTCTAGCAGACAATATAGATGCTAATCCATTAGACATGTTGGGTGAGGATTTTGTAGAGACCATAAACAACTATGATCTAGAACAGCAGGAAGTGAAAAAGGTGATTGGTATAGGAAAGAATTTACAGTTGAGAAGAATATATGGCACTGATTCTCAGACTGGACTAGATTGGCCTGAACGTCCCTTAGATGCAATCCCTCAAGTTGTTGATTCCAATTCAAAATTGAGAAGAGTATTAAGCAGCTCAGCAAGAATTGGCTTTAATTGGACAGACACATCTTTAAAACATGGAAGTGGGCTGAAGCGATCACACCACAGTTATGGGAACCTAGGCTTGATCTGGAAAGAGCCACAAGTGATGCCTGTTGAAGAAGTATTTGATGCCCACTCTGATGTATCTGACATGTTATCTGATGAGGAAGATAATATTTTCACTGAATTACCAATGAACCAAGAGGATATCGGATTTAGCACTGCGAAATCGCGTCCTAGATATGTCCGGATTGTCAGTAAGCAGATGGTAGGGATATATGTATCAATTTGGGTGCAGAGGAGGTTGAGAAGACACATCAATAATTTGAAAGTTTCTCCTGTTGGAGTTGGCCTAATGGGATACATGGGAAACAAGGGATCTGTTTCAGTTAGCATGTCTCTTTTTCAGTCACGTATGTGCTTTGTTTGTTCACATCTAACTTCTGGCCAAAAGGATGGAGCCGAACACAGGCGAAACTCTGATGTTAATGAGATTATACGACGCACCTGCTTCTCATCTGTCTTTGATTCAGATCAACCACAGACAATCCCTTCTCATGACCAGATTTTCTGGTTTGGAGACTTGAATTATCGAATCAGTATGTCGGATGTGGAGGTAAGAAAACTGGTGGCTCTAAAGAAGTGGGATGAACTGATGAATAATGATCAGTTAAGCAAAGAACTTCGTCATGGGCATGTATTTGAAGGATGGAAAGAAGGGTTGATAAACTTCCCTCCCACTTACAAATATGAATTTAATTCTGACAGATACCTTGGTGAGATCCCAAAAGAAGGCGAAAAGAAGAGAGCTCCTGCCTGGTGTGATCGAATACTGTGGCTTGGAAAAGGAATAAAGCAACTTTCATATGATCGTTCAGATATAAGGTTGTCAGATCATAGACCAGTGAGCTCCATTTTCTCAGTTGAAGTTGAAGTATTTGACCATCGCAAGCTTCAAAGAGCTCTCAATGTTAATAGTGCAGCAGTACACCCTGCGGTGTTCCTTGTGGATGAAGCCGATTTCTAA 1791 0.4109 MKTRRGKRSEAFWPSLVMKKWLNIKPKVYDFSEDEVDTETESEDDDIPSKAYKTRHRRGKSETLRAQYINTKEVRVTVSTWNVAGRVPCEDLEIDDWLCTDEPADIYIIGFQEVVPLNAGNVLGAEDNTPIPKWESIIRRTLNKSSETESKHKSYSAPPSPVLRTSSAADILADNIDANPLDMLGEDFVETINNYDLEQQEVKKVIGIGKNLQLRRIYGTDSQTGLDWPERPLDAIPQVVDSNSKLRRVLSSSARIGFNWTDTSLKHGSGLKRSHHSYGNLGLIWKEPQVMPVEEVFDAHSDVSDMLSDEEDNIFTELPMNQEDIGFSTAKSRPRYVRIVSKQMVGIYVSIWVQRRLRRHINNLKVSPVGVGLMGYMGNKGSVSVSMSLFQSRMCFVCSHLTSGQKDGAEHRRNSDVNEIIRRTCFSSVFDSDQPQTIPSHDQIFWFGDLNYRISMSDVEVRKLVALKKWDELMNNDQLSKELRHGHVFEGWKEGLINFPPTYKYEFNSDRYLGEIPKEGEKKRAPAWCDRILWLGKGIKQLSYDRSDIRLSDHRPVSSIFSVEVEVFDHRKLQRALNVNSAAVHPAVFLVDEADF 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3502 596 MobiDBLite consensus disorder prediction 33 56 - -
Sto6g3502 596 Gene3D Endonuclease/exonuclease/phosphatase 54 158 IPR036691 -
Sto6g3502 596 SUPERFAMILY DNase I-like 65 580 IPR036691 -
Sto6g3502 596 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 48 591 IPR045849 GO:0004445|GO:0046855
Sto6g3502 596 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 7 52 IPR045849 GO:0004445|GO:0046855
Sto6g3502 596 SMART i5p_5 261 569 IPR000300 GO:0016791|GO:0046856
Sto6g3502 596 Gene3D Endonuclease/exonuclease/phosphatase 291 587 IPR036691 -
Sto6g3502 596 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 7 52 - -
Sto6g3502 596 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 48 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3502 Sto-Chr6 40633980 40637647 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3502 329 575 Acyl Lipid Metabolism Gene Families AT2G43900 31.488 1.38e-36 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3502 K24221 - ccaj:109800886 933.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3502 6 40633980 40637647 Sto11g1840 11 17128379 17138833 CCT