Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1840 ATGATGAGAACAAGAAGAGGAAAACGTTCGGAGGCATTTTGGCCTTCCATTGTGATGAAGAAGTGGCTGAATATAAAGCCCGAGATGTATGATTTTAGTGAGGATGAAGTGGACACTGAAACGGAGAGTGAAGATGATGCTTACACTTTTAAAGACTCAAGAATGCACGTGAGAAGTGAAGACATTCCTCATAGAGCACAAGAGATTAAATCCATATTCCcaagtaaaactcaaatatcaGATACATTCTCTAAGGGAAACAAGGCAAGACACAGAAGGGGAAAATCAGAGACTCTACGTGTTCACTACATAAACACAAAGGAAGTGAGGGTAGCAATTGGCACTTGGAATGTTGCCGGAAGGCACCCATTGGAGGATCTTGAGATTGATGACTGGCTTTGTATGGAAGAGCCATCAGATATTTACATTCTTGGTTTCCAGGAGGTAGTCCCATTGAATGCTGGAAACGTACTGGGAGCAGAAGATAGTACACCCATCCCAAAATGGGAGGCAATCATTAGGAAAACTCTAAACAAATCATCAGAACCTGAAAGCAAACACAAATGCTACAGTGCCCCTTCTTCTCCAGTATTAAAATCTTGTGCTACTGATAATATTCTGGCAGAAACCATAGATGATCATCCATTAGACATGATGATGAACACACACATAGTAGCAAATACAGACAATTCTGAGCTGGAACAGAATTTAATGAGAATATATGGCATTGATTGGCCAGAACATCCACTAGATGCAATCCCCATCCCACAAGTCATCGTCGATTCGGATTCGAAATTGCGCAGAGTGGTGAGTAGCTCAGGCAGAATTGGATTGAACAAGAAGGAGAATGCAATGAAACGTTCACACCACAGTTCTGGAAACCTTTGTTCAATGTGGAATGAGCAGCAAGTGATTCCTCAGGTCATTGATTCCTTATCTGATGTGTGTGACATGTTTTCTGATGAGGAAAGTGATGCTTTCAGTGAGGTACCTAGGAAAGAAGAGGATGATGATAATGGAGAAGAGAGTGTGAAATGCTCACGTCCTAGGTATGTTCGAATTGTGAGCAAGCAGATGGTGGGGATTTATGTATCAGTATGGGTGGAGAGGAGTTTAAGAAGGCACATCAATAACTTGAAAGTTTTCCCTGTTGGTGTTGGCCTTATGGGCTACATGGGAAACAAGGGGTCTGTTTCAGTTAGTTTGACTCTGTTTCAGTCACGTCTGTGTTTTGTTTGTTCTCAtcttacttctgggcaaaaggATGGAGCTGAACAGAGGAGAAACTCTGATGTTCATGAAATTCTAAGACGAACCCGCTTCTCATCTGTCTTGGATACAGATCAACCACAAACAATCCCTTCCCATGACCAAATATTTTGGTTCGGGGATTTGAATTATCGTATCAACTTGTTGGATGAGGAGGTAAGAAAGCTGGTGGCTCTAAAAAAGTGGAATGATTTGATGAATAATGATCAGCTAAGCAAAGAACTACGTAGTGGGCATGTATTTGATGGATGGAAAGAAGGGCTGATAAACTTCCCACCCACATACAAGTATGAGATTAATTCAGATAGATATATTGGTGAGAACCCAaaagaaggagaaaagaagagatCTCCTGCTTGGTGTGATCGTATATTGTGGGTAGGAAGAGGAATAAAGCAACTAGCATACGGGCGAGCAGAAATAAGGCTCTCGGATCATCGTCCAGTTACTTCTGTTTTCTCAGTTCAAGTTGAAGTATTTGACCATCGCAAGCTACAAAGAGCTCTAAATTTCACTAGTGCAGCTGTACACCCAGAGCTAAGAGGAAGTAAAACCTATCTAAATGACCTTCGTTTAGATTTCCAGGTATCCACCCAGGCTTATTACCCTCAGTGGAGATCTTTGAGTTCTTTTGAGTCTCCTGATGAGTGGATCGAGAACTCGACGGtagaggaagatgaagatggcGACGCTGAGGATGTCGAAGGTAGACATGCTTGCTGGTGGTATTCTGAAATGAGAGAAGGTGGTTCTCATGGCATCACCTTGCTCCACGAAAAGAGAAGCCATCTGTGTGAAGACTACAGAGTATATAATCGTGCAGAGCCAGATTGGGATGAGTCTTACAACAATGACTTGACAAATCCTAGAAAAAGGATTCCCACAAGGCTTGAAGTGCCTATACCTTGGGGTCCCAACCAAGAACAACACCAACGCAGCAAAAGCAGAGGCAGTAGAGACCCAGAAACCCAGAACCCAAATCCCTTCATCCTCAAAGTATCCCAGAATGGTGTTTGA 2286 0.4116 MMRTRRGKRSEAFWPSIVMKKWLNIKPEMYDFSEDEVDTETESEDDAYTFKDSRMHVRSEDIPHRAQEIKSIFPSKTQISDTFSKGNKARHRRGKSETLRVHYINTKEVRVAIGTWNVAGRHPLEDLEIDDWLCMEEPSDIYILGFQEVVPLNAGNVLGAEDSTPIPKWEAIIRKTLNKSSEPESKHKCYSAPSSPVLKSCATDNILAETIDDHPLDMMMNTHIVANTDNSELEQNLMRIYGIDWPEHPLDAIPIPQVIVDSDSKLRRVVSSSGRIGLNKKENAMKRSHHSSGNLCSMWNEQQVIPQVIDSLSDVCDMFSDEESDAFSEVPRKEEDDDNGEESVKCSRPRYVRIVSKQMVGIYVSVWVERSLRRHINNLKVFPVGVGLMGYMGNKGSVSVSLTLFQSRLCFVCSHLTSGQKDGAEQRRNSDVHEILRRTRFSSVLDTDQPQTIPSHDQIFWFGDLNYRINLLDEEVRKLVALKKWNDLMNNDQLSKELRSGHVFDGWKEGLINFPPTYKYEINSDRYIGENPKEGEKKRSPAWCDRILWVGRGIKQLAYGRAEIRLSDHRPVTSVFSVQVEVFDHRKLQRALNFTSAAVHPELRGSKTYLNDLRLDFQVSTQAYYPQWRSLSSFESPDEWIENSTVEEDEDGDAEDVEGRHACWWYSEMREGGSHGITLLHEKRSHLCEDYRVYNRAEPDWDESYNNDLTNPRKRIPTRLEVPIPWGPNQEQHQRSKSRGSRDPETQNPNPFILKVSQNGV 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1840 761 MobiDBLite consensus disorder prediction 701 761 - -
Sto11g1840 761 MobiDBLite consensus disorder prediction 743 761 - -
Sto11g1840 761 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 8 603 - -
Sto11g1840 761 SUPERFAMILY DNase I-like 102 596 IPR036691 -
Sto11g1840 761 Gene3D Endonuclease/exonuclease/phosphatase 279 606 IPR036691 -
Sto11g1840 761 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 8 603 IPR045849 GO:0004445|GO:0046855
Sto11g1840 761 MobiDBLite consensus disorder prediction 323 343 - -
Sto11g1840 761 SMART i5p_5 297 584 IPR000300 GO:0016791|GO:0046856
Sto11g1840 761 Gene3D Endonuclease/exonuclease/phosphatase 90 197 IPR036691 -
Sto11g1840 761 MobiDBLite consensus disorder prediction 325 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1840 Sto-Chr11 17128379 17138833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1840 351 584 Acyl Lipid Metabolism Gene Families AT1G65580 32.130 6.20e-34 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1840 K24221 - ccaj:109800886 894.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3502 6 40633980 40637647 Sto11g1840 11 17128379 17138833 CCT