Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3498 ATGAATTCCTGCTTGGACTCAGGGAAACTTGCCTCTTTGGCATTTTTGGTTTCTGGAGGGATCGTCTTGCAGATTTTGGCATGTGCCTTGTATAATAATTGGTGGCCAATGTTAACTGCCATAATGTTGGTGTTTCTTCCCATGCCTCTGCTGTTCCTTGGGGGTTCTGGTGGTTCCACTTTCTTATATGAATCTGATGATAGCTGGGAGAGTGCAAGCAAGTTCTTAACTGGAGCCTCAGTTATTGGAAGCATTGCCATCCCAATTATATTAAAGCATGGTGGTATTATTGGTTGGGGTGCACTTGCAATGGAACTCTCTTCTTTCTTCATGTTCGTTTTAGCCATATTGTGTTACTTATGGTTATGGATCGGTGATCAAGATTATTACAGTATGCTCTAA 402 0.4179 MNSCLDSGKLASLAFLVSGGIVLQILACALYNNWWPMLTAIMLVFLPMPLLFLGGSGGSTFLYESDDSWESASKFLTGASVIGSIAIPIILKHGGIIGWGALAMELSSFFMFVLAILCYLWLWIGDQDYYSML 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3498 133 Pfam Vacuolar protein sorting 55 11 123 IPR007262 -
Sto6g3498 133 PANTHER LEPTIN RECEPTOR-RELATED 1 123 IPR007262 -
Sto6g3498 133 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG 1 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3498 Sto-Chr6 40587765 40588755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3498 1 131 EF-hand Containing Proteins AT1G32410 63.359 6.63e-56 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3498 - - pvy:116138374 176.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3498 6 40587765 40588755 Sto11g1845 11 17186604 17187971 CCT