Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1845 ATGGCAGACTTACCAGGTTATGTTCGTTCCTGCCTGCACACAGGGAAACTTGCCTTTTTGGCAATTTTGGTCTCGGGTGGGATTGTCTTGCAAATTCTGGCATGTGCATTGTATAATAACTGGTGGCCGATGTTATCTACAATAATGTATGTTCTTCTTCCCATGCCTTTGCTGTTCTTTGGATCTGATGGTGGTTTATTTTCTGAGTCTAGCAGCAGCAGTTGGGTAAATGCAACCAAGTTCTTGACTGGAGCCTCAGCTGTTGGAAGCATAGCCATACCAGCCATATTAAAACATGCTGGAGTTATTGGTTGGGGAGCACTTGCAATGGATCTCTCCTCCTTCGTTGTGTTCGTATTAGCCATTATGTGTTTCATACAGATGAATGACGATGACGATTATACGGTGCTTTGA 414 0.4372 MADLPGYVRSCLHTGKLAFLAILVSGGIVLQILACALYNNWWPMLSTIMYVLLPMPLLFFGSDGGLFSESSSSSWVNATKFLTGASAVGSIAIPAILKHAGVIGWGALAMDLSSFVVFVLAIMCFIQMNDDDDYTVL 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1845 137 Pfam Vacuolar protein sorting 55 17 132 IPR007262 -
Sto11g1845 137 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG 1 134 - -
Sto11g1845 137 PANTHER LEPTIN RECEPTOR-RELATED 1 134 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1845 Sto-Chr11 17186604 17187971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1845 1 133 EF-hand Containing Proteins AT1G32410 73.134 2.65e-66 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1845 - - twl:119980885 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3498 6 40587765 40588755 Sto11g1845 11 17186604 17187971 CCT