Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3100 ATGTCAATTGCTGATGTTGCTCGGAGTTCGATTCGTGCCGAATCGTTCTTCTGCGAGGACCAGGTGGGGCCTTGTTTTGGTGAATCCATCTTGATTTACCTTACTGTGGACGGCGCTGTGATGCCCATGCGTGTTTTGGAGTCCGATTCCATTGCGTCTGTTAAACTCAGGATTCAGACATGTAAGGGTTTCGTGGTGAAGAAGCAGAAGCTGGTTTTCGGAGGAAGAGAGCTGGCTCGCAATGATTCTCTTATCAAGGAGTACGGCGTCACCGGCGGTAAAGTTCTTCATCTGGTCCTCCGACTCTCCGATCTTCTTTTCATCGTCGTCAGGACAACGTCCGGCAGGGAATTTGAGTTTCACGTCGATCGCCATAGAAATGTTGGCCATCTCAAGCAGCggattaaaaagaaaggaattaAAGGATTCGTCGATCTCGACGATGATGACGATCTTTTTTGCAATGGCGAGAAGCTCGAGGACCAGAAGGTGTTTCACGACTTATGCAAGAGAGACGATGATGTGATCCATTTGGTGGTTCAGAAATCAGCCAAGAATGGAAGCAACAACAAACTCGAGGAGGCAGGGAAGGGTGTAAATTTCCGATTGGAACCAATAATTGTGAACCCTAAGATCCACATACCGCCTTTCCTTTGGGAGATGATGAACTCAACGTATGAGGGATTGAAGCAAGGGAATCGTCCAATAAGGTCCTCTGAGGGTACAGGAGGGACATACTTCATGCAGGATCCAACAGCTCAAGAATATGTCTCAGTGTTTAAACCCATTGATGAGGAGCCAATGGCTGAGAACAACCCTCAAGGGCTTCAAAGATCATCAAACGGGGAAGGGCTAAAGATAGGGACAAAGGTTGGAGAAGGAGCAGTGAGGGAAGTAGCAGCATATATATTGGATCATCCGAGGAGTGGAAGACGGGAGGTATCAGGTGAAGCAGTAGGGTTTGCAGGTGTTCCTCCTACGGTTATGGTTAAGTGCTTGCATGAAGGATTTAACCATCCACAGGGGTATAGCTGTTCAGCCAAACACATGAAGATCGGGTCTCTACAGATGTTCATGAATAATGATGGAAACTGTGAGGACATTGGACCAGGGGCTTTTCCAGTGGAGGAGGTGCATAAGATTACTGTGCTTGACATCAGAATGGCTAATGCAGACAGACATGCTGGCAACATTTTGTACAGGAAAGATGCAGCAACAAATCGCACTGTCCTCATTCCCATTGATCATGGCTACTGTATGCCAGGGAAATTTGAAGATTGCACTTTTGACTGGCTTTACTGGCCACAAGCACGCCAACCTTACTCTCCCGATACAGTTGATTATATAAAAACAATGGATGCTGAGAAAGACATAGAATTACTGAAATATTATGGTTGGGATGTTCCACTCGAGTGTGCACGAATATTCCGGATTTCAACAATGCTGCTTAAGAAAGGGGTTGAGAGAGGTCTCACTCCTTATGCCATCGGAAATATAATGTGTAGGAAAAATATGAACAAGGAATCTGAAATTGAGGAGATGGTTCAGGAAGCCCAGGATTCCTTGCTGCCAGGCATGAGTGAATCTGCATTTCTTGAAGCTATCTCACAGGTCATGGATTCCCGTCTGGACCAGAAACAGcttgaaaattag 1653 0.4549 MSIADVARSSIRAESFFCEDQVGPCFGESILIYLTVDGAVMPMRVLESDSIASVKLRIQTCKGFVVKKQKLVFGGRELARNDSLIKEYGVTGGKVLHLVLRLSDLLFIVVRTTSGREFEFHVDRHRNVGHLKQRIKKKGIKGFVDLDDDDDLFCNGEKLEDQKVFHDLCKRDDDVIHLVVQKSAKNGSNNKLEEAGKGVNFRLEPIIVNPKIHIPPFLWEMMNSTYEGLKQGNRPIRSSEGTGGTYFMQDPTAQEYVSVFKPIDEEPMAENNPQGLQRSSNGEGLKIGTKVGEGAVREVAAYILDHPRSGRREVSGEAVGFAGVPPTVMVKCLHEGFNHPQGYSCSAKHMKIGSLQMFMNNDGNCEDIGPGAFPVEEVHKITVLDIRMANADRHAGNILYRKDAATNRTVLIPIDHGYCMPGKFEDCTFDWLYWPQARQPYSPDTVDYIKTMDAEKDIELLKYYGWDVPLECARIFRISTMLLKKGVERGLTPYAIGNIMCRKNMNKESEIEEMVQEAQDSLLPGMSESAFLEAISQVMDSRLDQKQLEN 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3100 550 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 2 1 545 - -
Sto6g3100 550 MobiDBLite consensus disorder prediction 266 285 - -
Sto6g3100 550 Gene3D - 30 105 - -
Sto6g3100 550 Pfam Phosphatidylinositol 3- and 4-kinase 241 495 IPR000403 -
Sto6g3100 550 SUPERFAMILY Ubiquitin-like 104 183 IPR029071 -
Sto6g3100 550 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 545 IPR044571 -
Sto6g3100 550 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 232 530 IPR000403 -
Sto6g3100 550 ProSiteProfiles Ubiquitin domain profile. 32 101 IPR000626 GO:0005515
Sto6g3100 550 CDD Ubl_ubiquitin_like 108 179 - -
Sto6g3100 550 Gene3D - 107 197 - -
Sto6g3100 550 ProSiteProfiles Ubiquitin domain profile. 106 185 IPR000626 GO:0005515
Sto6g3100 550 Pfam Ubiquitin family 36 102 IPR000626 GO:0005515
Sto6g3100 550 Pfam Ubiquitin family 108 182 IPR000626 GO:0005515
Sto6g3100 550 SUPERFAMILY Protein kinase-like (PK-like) 388 545 IPR011009 -
Sto6g3100 550 SMART ubq_7 30 101 IPR000626 GO:0005515
Sto6g3100 550 SMART ubq_7 106 181 IPR000626 GO:0005515
Sto6g3100 550 SUPERFAMILY Ubiquitin-like 35 103 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3100 Sto-Chr6 37934768 37936748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3100 1 545 Acyl Lipid Metabolism Gene Families AT5G24240 55.148 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3100 - - gmx:100809172 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3100 6 37934768 37936748 Sto6g3100 6 37934768 37936748 ECH
Sto6g3100 6 37934768 37936748 Sto6g1154 6 11080145 11082404 ECH