Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3043 ATGTTGGACGGTCGTTCCTGTGTGGTTTCGAGGTTGTTTCCGAGCTCTTGCCAGGCAGAGAACAAGTGGTCTTACATGAGCTATTTGCGAGATGTGAAAAATAGCAAGCGTCTGGCGGATTTCGAAGGGGAGGAGGATGAACCCCAACCAAGGAAGTCTGCTAAGATGTTTGATTCTTGCCCAACAATTGAAACAGCTGGAATTGTTGGGGAGCAGCAATCTTGTCAGGCTAAGGATGCATTGGATTCTTGTTCTGTTATTCATCAGATGGATCAAAACAGCTCCACCATCCCGGAACAAAAGTCTCATGAGTGCTTGAGCAGTGACCACAGAGTTGAAAAAGCTGAAGCTTTGTCTGACCAACTATGTGATGAACAACAGCAGCATCAAGCTGGAGATGCATTTGATTTTGGTGGACAGCAATCTGATGAGCAGCAGCAGCAACATGCTGGAGATTCATCGGATTCAGGTTCTCTCTTGCCACGCATGAATCGAGACAGCTCAATTGCATGTCTCAGCCGCTGCTCAAGGTCTGATTATGGTTCTCTTGCATCACTGAATAAGAGCTTTCGCAACTTAATTCGAAGTGGTGAGCTTTATACATGGAGGAGACTGAATGGTATTATTGAACACTGGGTTTACTTTTCCTGTGCCCTCCTTGAATGGGAAGCCTATGATCCAATTCGCCAACGATGGATGCACCTACCAAGGATGGCTTCCAATGAATGCTTCATGTGTTCAGACAAGGAGTCTCTGGCTGTGGGTACTGAACTTCTTGTATTTGGGAGGGAGCTGACCTCTCATGTCATATACAGATACAGTCTCTTGACAAACTCTTGGTCATCTGGAATGAGGATGAACGCTCCAAGATGCTTGTTTGGGTCTGCTAGCCTTGGAGAGATTGCAATTTTAGCTGGTGGATGTGATTCAGATGGGCGTATTCTTAGCTCAGCAGAATTATATAATTCCGAGAATCAAACCTGGGAAACACTCCCAAGCATGAACAAACCCAGGAAAATGTGTTCTGGGATTTTCATGGATGGAAAATTTTACGTTATTGGGGGAATTGGAGGAAGTGATTGCAAGGTTCTTACATGTGGTGAGGAGTATAATTTACAGACTAGAACATGGACAGAAATTCCTAACATGTCCCCTGGACGTAGTAGTAGGGGAACGGAGATGCCTGCAACAGCTGAGGCACCTCCCCTTGTTGCTGTTGTAAATAATGAATTGTATGCTGCCAATTATGCTGATATGGAGGTAAAGAAATAtgacaaagaaagaaaattgtggCTTACCATTGGGAGACTCCCTGAAAGAGTAGTGTCAATGAATGGTTGGGGTCTTGCATTCAGAGCTTGTGGAAACCGGCTTATTGTCATTGGTGGACCTAGGACTCATGGTGAGGGTTTTATTGAACTCAACTCGTGGGTTCCTAGTGAAGGACCGCCACAATGGAACCTGCTCGCCAGAAAACGGTCTGGTAACTTTGTCTATAATTGTGCTGTGATGGGATGCTGA 1521 0.4471 MLDGRSCVVSRLFPSSCQAENKWSYMSYLRDVKNSKRLADFEGEEDEPQPRKSAKMFDSCPTIETAGIVGEQQSCQAKDALDSCSVIHQMDQNSSTIPEQKSHECLSSDHRVEKAEALSDQLCDEQQQHQAGDAFDFGGQQSDEQQQQHAGDSSDSGSLLPRMNRDSSIACLSRCSRSDYGSLASLNKSFRNLIRSGELYTWRRLNGIIEHWVYFSCALLEWEAYDPIRQRWMHLPRMASNECFMCSDKESLAVGTELLVFGRELTSHVIYRYSLLTNSWSSGMRMNAPRCLFGSASLGEIAILAGGCDSDGRILSSAELYNSENQTWETLPSMNKPRKMCSGIFMDGKFYVIGGIGGSDCKVLTCGEEYNLQTRTWTEIPNMSPGRSSRGTEMPATAEAPPLVAVVNNELYAANYADMEVKKYDKERKLWLTIGRLPERVVSMNGWGLAFRACGNRLIVIGGPRTHGEGFIELNSWVPSEGPPQWNLLARKRSGNFVYNCAVMGC 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3043 506 Pfam Kelch motif 337 384 IPR006652 GO:0005515
Sto6g3043 506 Pfam Kelch motif 289 335 IPR006652 GO:0005515
Sto6g3043 506 MobiDBLite consensus disorder prediction 134 160 - -
Sto6g3043 506 SMART kelc_smart 349 397 IPR006652 GO:0005515
Sto6g3043 506 SMART kelc_smart 257 300 IPR006652 GO:0005515
Sto6g3043 506 SMART kelc_smart 301 348 IPR006652 GO:0005515
Sto6g3043 506 Gene3D - 206 492 IPR015915 GO:0005515
Sto6g3043 506 SUPERFAMILY Kelch motif 219 503 IPR015915 GO:0005515
Sto6g3043 506 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 1 506 - -
Sto6g3043 506 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 1 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3043 Sto-Chr6 37478669 37480261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3043 166 382 EF-hand Containing Proteins AT4G39560 26.147 3.97e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3043 - - gmx:100791897 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3043 6 37478669 37480261 Sto3g1525 3 11281950 11283725 CCT
Sto6g3043 6 37478669 37480261 Sto6g3043 6 37478669 37480261 ECH