Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1525 TTGCAACATGTGCAAAAACAGTCGTCAGCAGTTTTGAAGCCTTCTAGCCGCAATCCCAAACGAAAAATGTTGGAGGGTTCATCCAGTCTCGTTTCAAGGGAGTTGCCTAACTCATGTAACGAAGAAAAGCTATTGGCCTACGACACTCAAAGCGGGAGGGACCTATCAGGCAATAAGCACCCacgggaagaagaaggggaaggggaAGAAGTGGTGAGAAAGTTATGCAAACTTGCTGATGATACTAAGGAAGAGGAGAAACAGATCGTGAAGGTCTCTGAAGACATTTCCCTTCCTGAGAACAAGATAAGGAATGTTGATGATCCATCCGAtatcaattttcttttcacCAACATTGACAGGGACATGTCATTACAATGTCTTATGCGGTGCACCAGGGCCGATCATCCCATAATTGCCTCATTGAATAGTGATTTTCGGTCTCTCATTCGCAGTGGAGAATTGTATAAGGTCAGGAGGGAGGCCGGAATTGTGGAGTACTGGGTTTACATCTCCTGTGGCCTCAGTGAATGGGAGGCATACGATCCAAATGAAGGCCGTTGGGTGACATTGCCAATATTGCCTGCAAATCAATGCTTTCTGTGCTCAGACAAGGAGTCACAGGCTGTAGGTACTGATCTTCTTGTTTTTGGAAAGGATATCATGGCTTCTGTCATTTACAAATACAGCATTTTGACCAATTCTTGGTCACATGGCACAAGCATGAACTTTCCCAGATGCTTGTTCGCTTCTGGGAGTCTTGGAGAAATTGCAATAGTAGCTGGAGGTTGTGATGCAGTTGGCAATATTACAAATGCAGCTGAGCTTTACAACTCGGGAACTCAAACTTGGGAAATGCTTCCAAGCATGAAATTTGCAAGGAAGATGTGTGCTGGTGCATTTATGGATGGAAAATTCTATGTTATTGGCGGCATTAGTAAAGTCAACACATCGCAACTAACAAGTGGTGAGGAGTTCGATCTGAAGACAAGAACATGGCGCTGTATACCTGACATGTTCCCTCGAAATGGTAGATCTGTGGTGAATAGTGCTTCTGAGGCACCACCTCTTATTGCTGTTGTGGGTAATCAATTGTATGCTGCTGATTATGCAGAGGAGGTGGTAAGGAGATATGTCAAAGAACTTAACTCTTGGGTCTCAATTGGAGGACTTCCTAGGCGTGTGACTTCGATGAAAGGTTGGGGATTAGCCTTTCGGGCTTGTGGAGATCAGCTGATTGTTATCGGTGGCCCTAAGGTTCCTGAGGGAAGGTTTATTGAGGTTTATGGTTGTGTCCCAGGTGTTGACGCACTGGAGTGGAACTTGCTTGCCCGTAGGCACTCGGGGCACTTTGTGTATAACTGTGCAGTGATGGGATGCTGA 1383 0.4418 LQHVQKQSSAVLKPSSRNPKRKMLEGSSSLVSRELPNSCNEEKLLAYDTQSGRDLSGNKHPREEEGEGEEVVRKLCKLADDTKEEEKQIVKVSEDISLPENKIRNVDDPSDINFLFTNIDRDMSLQCLMRCTRADHPIIASLNSDFRSLIRSGELYKVRREAGIVEYWVYISCGLSEWEAYDPNEGRWVTLPILPANQCFLCSDKESQAVGTDLLVFGKDIMASVIYKYSILTNSWSHGTSMNFPRCLFASGSLGEIAIVAGGCDAVGNITNAAELYNSGTQTWEMLPSMKFARKMCAGAFMDGKFYVIGGISKVNTSQLTSGEEFDLKTRTWRCIPDMFPRNGRSVVNSASEAPPLIAVVGNQLYAADYAEEVVRRYVKELNSWVSIGGLPRRVTSMKGWGLAFRACGDQLIVIGGPKVPEGRFIEVYGCVPGVDALEWNLLARRHSGHFVYNCAVMGC 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1525 460 SMART kelc_smart 213 256 IPR006652 GO:0005515
Sto3g1525 460 SMART kelc_smart 257 304 IPR006652 GO:0005515
Sto3g1525 460 SMART kelc_smart 305 352 IPR006652 GO:0005515
Sto3g1525 460 MobiDBLite consensus disorder prediction 1 36 - -
Sto3g1525 460 MobiDBLite consensus disorder prediction 55 69 - -
Sto3g1525 460 MobiDBLite consensus disorder prediction 1 69 - -
Sto3g1525 460 Gene3D - 156 452 IPR015915 GO:0005515
Sto3g1525 460 Pfam Kelch motif 293 339 IPR006652 GO:0005515
Sto3g1525 460 Pfam Kelch motif 245 290 IPR006652 GO:0005515
Sto3g1525 460 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 23 460 - -
Sto3g1525 460 SUPERFAMILY Kelch motif 174 457 IPR015915 GO:0005515
Sto3g1525 460 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 23 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1525 Sto-Chr3 11281950 11283725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1525 107 333 Miscellaneous Gene Families AT4G33900 27.234 1.49e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1525 - - gmx:100788507 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3043 6 37478669 37480261 Sto3g1525 3 11281950 11283725 CCT