Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3018 ATGAATATGATCAtcaaaatgaataaattttatggTGGAGTTCTGATTGCCTCCTTGTTTATGTTGTTTATGCTTATGATACTGAGATATGGGCTCATGAAGAACCCTATTAGTGAAGGCTATCTGACTATACCAATCATCCTTAATGGTACTAACCCTCTTGAATGGATAAATCCTGTGGTTCCACCTGCTGTTCAGAATCCGGAGAGTGGTTCCAAAGTCGTCTCTACTGATGTTGTGGTATCTACACTGTTTGCTTCGAGAAACTTCTCCAAGGAAGAGAAACAAGCTCTGCAGACATGGAACCAATTAAAACACTTGATTGATCATGCTCAGGGTTTACCTAATGCAGCAGAAGCTATAAAGGAAGCTGCAGGTTTGTGGAATAGTCTAGTGTACTCAGTTGAAGAGCAAAGACAAGGGAATACAAATGACAGTTTAAAtgggaaaataaaagagaagcaATGTCCACATTTTCTTAATAATATGAGTTCAATGGACTTCAATAATAGTAGTTACAAATTGCAATTTCCTTGTGGCCTGACACAAGGTTCTTCCGTCACTGTCATTGGCGTTCCAAACGGTCTTCTTGGTGATTTTCGGATTGACTTGACTGGAGAAGCACTTCCTGGGGAGCCTGATCCTCCACTTATTTTGCACTACAATGTTAGGCTTCATGGTGATAAAATCACTGAAGATCCTGTAATTGTCCAAAACACATGGACTTTAGCTCATGATTGGGGTGAAGAGGAGCGGTGTCCATCCCCTACTCCTGAAAAGGTCAAGAAAGTTGATGAATTGTGGCAGTGCAATAATATCATAGGGAAGAACATTAGCCAACTTTCCATGACTGGCATGTCTTCACACATTTCAAGGAAATTTTCAGCATCAGAAGggcattttaaaaatagaaaatactttCCTTTTAAGCAAGGTTTACCATTTGTTGCAACTCTTCGAGTGGGATCAGAGGGAATCCAGATGACTGTTGATGGAAAGCACATATCATCATTTGCTTTTCGTGAAACTTTGGAGCCATGGCTTGTCAGTGAGATGAGGATTTCTGGGGACATCAAGTTGATTTCTGTTCTTGCCAGTAGTTTGCCCACTTCAGAAGATACAGAACATATCATTGATCTGGAATCCTTGAAATCAAGTCCTCTATCTGTACAGACTCCTTTGGATCTCTTAATTGGTGTTTTCTCTACAGCTAACAATTTTAAGCGCAGGATGGCTGTCAGAAGAACCTGGCTGCAGTACAATGCAGTTCGATACAATACAGCTGCCGTGCGCTTCTTTGTTGGTTTGCATAAAAACCAAATAGTTAATGAAGAACTGTGGAAAGAAGCAGAGACCTATGGAGACATACAATTGATGCCATTTGTTGACTACTACAGCCTCATCACTTGGAAAACTTTAGCAATCTGCATATATGGGACACAGATTGTTTCCGCAAAGTATGTCATGAAGACAGATGATGATGCATTTGTTCGTGTAGATGAAGTACTAGCTTCTTTGAATAGGATCAGTGTGACTCATGGGTTGCTTTATGGACTCATAAATTCGGACTCCCGACCTCACCGTAATACTGATAGCAAATGGTACATCAGCTCTGAGGAATGGCCTGAGTCAACTTATCCTCCTTGGGCGCACGGTCCTGGCTATGTGATCTCTCATGATATAGCAAGGTCGGTGTACAGGAGATACATAGACGGTCGTTTGAAGATGTTCAAGTTAGAAGATGTGGCAATGGGAATCTGGATTGCAGACATGAAGAAGGAAGGTCTAGAGGTTCGTTATGAGAACGAAGAAAAAGTGTATAACGAAGGCTGCAAGGATAACTACGTGGTTGCTCATTACCAAGGTCCAAGGGAGATGCTGTGTTTGTGGCAGAAACTTCAGGAAGGAAAAGGTGCAATATGCTGTGGTAATAGAAGAAGATGA 1944 0.4028 MNMIIKMNKFYGGVLIASLFMLFMLMILRYGLMKNPISEGYLTIPIILNGTNPLEWINPVVPPAVQNPESGSKVVSTDVVVSTLFASRNFSKEEKQALQTWNQLKHLIDHAQGLPNAAEAIKEAAGLWNSLVYSVEEQRQGNTNDSLNGKIKEKQCPHFLNNMSSMDFNNSSYKLQFPCGLTQGSSVTVIGVPNGLLGDFRIDLTGEALPGEPDPPLILHYNVRLHGDKITEDPVIVQNTWTLAHDWGEEERCPSPTPEKVKKVDELWQCNNIIGKNISQLSMTGMSSHISRKFSASEGHFKNRKYFPFKQGLPFVATLRVGSEGIQMTVDGKHISSFAFRETLEPWLVSEMRISGDIKLISVLASSLPTSEDTEHIIDLESLKSSPLSVQTPLDLLIGVFSTANNFKRRMAVRRTWLQYNAVRYNTAAVRFFVGLHKNQIVNEELWKEAETYGDIQLMPFVDYYSLITWKTLAICIYGTQIVSAKYVMKTDDDAFVRVDEVLASLNRISVTHGLLYGLINSDSRPHRNTDSKWYISSEEWPESTYPPWAHGPGYVISHDIARSVYRRYIDGRLKMFKLEDVAMGIWIADMKKEGLEVRYENEEKVYNEGCKDNYVVAHYQGPREMLCLWQKLQEGKGAICCGNRRR 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3018 647 SUPERFAMILY Concanavalin A-like lectins/glucanases 173 366 IPR013320 -
Sto6g3018 647 SMART Gal_bind_lectin_2 177 365 IPR001079 GO:0030246
Sto6g3018 647 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 72 635 IPR002659 GO:0006486|GO:0016020|GO:0016758
Sto6g3018 647 Pfam Galactosyltransferase 408 592 IPR002659 GO:0006486|GO:0016020|GO:0016758
Sto6g3018 647 Pfam Galactoside-binding lectin 173 364 IPR001079 GO:0030246
Sto6g3018 647 Gene3D - 162 364 - -
Sto6g3018 647 PANTHER - 72 635 - -
Sto6g3018 647 CDD GLECT 173 363 IPR001079 GO:0030246
Sto6g3018 647 Gene3D - 388 626 - -
Sto6g3018 647 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 173 366 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3018 Sto-Chr6 37255229 37258599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3018 7 642 Glycosyltransferase AT1G26810 60.748 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3018 K14413 - gmx:100782548 1053.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0757 3 5254665 5258437 Sto6g3018 6 37255229 37258599 CCT
Sto6g3018 6 37255229 37258599 Sto6g3018 6 37255229 37258599 ECH