Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0757 ATGAAGAAGTGGTATGGAGGCTTGTTGATCATCGCTCTGGGAATGATGTTGACTCTCCTTTACAGCCTTATTGGAATTAAGCCACAGAAACAGTTAGTAAAGCAGTCAGCCTACAGTTTCTTCAATAATCATGCACCAAATGACTCAAGTACAAGAAACCATCTTACTATAGACTCTTCTGAGGTTGAACTAAAAAAAGTTccaaaaccaacaaaaaaaccACATTATATACATGTTGAAGGGCTTTATGATCTTTATGACATGAAAAACTTTTCTGAGGGAGAGTTGAAAGCCATGCTTGTATGGACACCCTTGTTTCCCCTGCTGTCAAGGTCAGATGCTTTACCTGACACTGGTCAGGGAGTTAAAGAGGCTTCTATAGCATGGAAAGAGTTGTTGTCTACAATTGAGAATGACACAGCCTCTAGGATTAGCAAGATAGACAGCCCAGAATATCAAAACTGCCCATTGTCTGTAACGACACTTGGTAAGACAGTGGCAAGCAGTGGTGTCATTCTTGAGCTTCCTTGTGGTCTGGTCGTTGATTCTTCTATTACATTGATTGGGATTCCAAATGGGCAAAACAGAAGCTTTCAGATTGACCTTGTAGGCCAGCAAAAGGAAGAAGAACCAAATCCTCCAATCATCTTGCACTATAATGTGAGTCTTCCTGGAGAAAATTTGACAGAGGATCCCTTTATAGTTCAAAATACATGGACTGATGAGCTTGGGTGGGGAAAAGAGGAAAGATGTCCTTCTCGTGGTTCTGCTAACATTCAAGTTGATGGACTTGTTGTCTGCAATGTACAAGTTGCCAGAAGCAGGAACGAGGAGAATCCAAGCGTGGGACAACCTTCTAGTGATATACCTGCTAACATTTCATGGGAAAGTGCACATAGAACTGGTAATTTCCCCTTTTCTGAGGGGAATCCTTTCACTGCCACATTGTGGGTTGGTTCAGAGGGATTTCACATGACTGTGAATGGAAGGCATGAAACATCTTTTGCGTTTAGGGAGGTAAGTGTTTCATGGATGCAGAAACTTGAACCATGGTTAGTTAGCAGCATCAAAGTAGCAGGCAGTTTAAGTCTCTTATCTGCTCTGGCAAAAGGCTTACCCGTTACTGATGATAATGAGATAATAATTGATGCTGAGACACTGAAAGCTCCTTCTATCCCCAGAAAAAGGCTTATTTTGTTAATTGGGGTATTCTCTACTGGAAATAACTTTGAGCGTCGAATGGCCCTCAGGAGGTCCTGGATGCAGTATGAGGCTGTACGTTCTGGGCAAGTAGCTGTCCGATTTTTCATTGGGCTTCACAAGAACAATAGAGTTAATTTTGAGCTGTGGAGAGAAGCTCAGGCTTATGGAGATATCCAATTTATGCCTTTTGTTGATTATTATGGTTTGATCACCTTCAAAACAATTGCCGTATGCATTCTAGGGACGAAAATCATCCCTTCTAAGTACATCATGAAAACAGATGATGATGCTTTTGTTAGGATTGATGAAGTGCTTTCTAGCCTTAAGGGAAAGCCATCAGAGGGCCTTTTATATGGTCTCATATCTTCCAAATCATCACCTCACAGGGATAAAAACGGCAAATGGTACATCAGTGAGGAGGAATGGCCACATGATTCGTACCCACCCTGGGCTCATGGTCCGGGTTATGTCATCTCTCGAGACATTGCAAAATTCATCGTTCATGGCCATGAGGAAAGAAAACTCAAgCTCTTCAAATTAGAAGATGTTGCCATGGGGATATGGATTGAAGAGTTCAAGAAAAGTGGTAAAGAAGTACATTACGAAAATGATGAGAGGTTTTACAATGCTGGATGTGAATCTAATTATATACTTGCCCATTACCAAAATCCAAGGAAGGTGCTATGCCTTTGGGAGAGGCTGCAGAAAGAACACAAGCCAGAATGCTGCGAGTAG 1938 0.4133 MKKWYGGLLIIALGMMLTLLYSLIGIKPQKQLVKQSAYSFFNNHAPNDSSTRNHLTIDSSEVELKKVPKPTKKPHYIHVEGLYDLYDMKNFSEGELKAMLVWTPLFPLLSRSDALPDTGQGVKEASIAWKELLSTIENDTASRISKIDSPEYQNCPLSVTTLGKTVASSGVILELPCGLVVDSSITLIGIPNGQNRSFQIDLVGQQKEEEPNPPIILHYNVSLPGENLTEDPFIVQNTWTDELGWGKEERCPSRGSANIQVDGLVVCNVQVARSRNEENPSVGQPSSDIPANISWESAHRTGNFPFSEGNPFTATLWVGSEGFHMTVNGRHETSFAFREVSVSWMQKLEPWLVSSIKVAGSLSLLSALAKGLPVTDDNEIIIDAETLKAPSIPRKRLILLIGVFSTGNNFERRMALRRSWMQYEAVRSGQVAVRFFIGLHKNNRVNFELWREAQAYGDIQFMPFVDYYGLITFKTIAVCILGTKIIPSKYIMKTDDDAFVRIDEVLSSLKGKPSEGLLYGLISSKSSPHRDKNGKWYISEEEWPHDSYPPWAHGPGYVISRDIAKFIVHGHEERKLKLFKLEDVAMGIWIEEFKKSGKEVHYENDERFYNAGCESNYILAHYQNPRKVLCLWERLQKEHKPECCE 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0757 645 Pfam Galactosyltransferase 411 594 IPR002659 GO:0006486|GO:0016020|GO:0016758
Sto3g0757 645 SUPERFAMILY Concanavalin A-like lectins/glucanases 173 363 IPR013320 -
Sto3g0757 645 SMART Gal_bind_lectin_2 175 369 IPR001079 GO:0030246
Sto3g0757 645 Gene3D - 169 367 - -
Sto3g0757 645 CDD GLECT 170 366 IPR001079 GO:0030246
Sto3g0757 645 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 86 637 IPR002659 GO:0006486|GO:0016020|GO:0016758
Sto3g0757 645 Gene3D - 393 641 - -
Sto3g0757 645 Pfam Galactoside-binding lectin 171 365 IPR001079 GO:0030246
Sto3g0757 645 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 171 370 IPR001079 GO:0030246
Sto3g0757 645 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE GALT1 86 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0757 Sto-Chr3 5254665 5258437 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0757 56 645 Glycosyltransferase AT3G06440 55.051 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0757 K20843 - gmx:100816729 1030.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0757 3 5254665 5258437 Sto6g3018 6 37255229 37258599 CCT
Sto3g0757 3 5254665 5258437 Sto3g0757 3 5254665 5258437 ECH