Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0788 ATGATAAACCCAAATGATCCTGAGGAAAATCCTGATTTAGACCCCAACAATTCATCTTCTGCTGACCTACCTCCTTCAAAACCCAGAGCTGATCTGAAGGAGCCGGCTGGAAAGGGATCAGCAAAATCATCACTTGAGTTACAGAAGAGCTTGGATAGTGATCCTAATGATTCCTTTGGCTCTCCAGCTCGTCCTGGAGGCCAAGGGGTAGGCTCCACTGATAACCGTAGAAGGCCTTCAAGACAGAGTGCTGGGTCTGAATACAGCATTGAACGATCACCTCTTCATCGCCAGGCAAGGACCCCAGGCAGAGATAGTCCATcttttgaaggaaagaatccatATGACAGTAGCCATGGTACACCAGGAAGATCCCGACTAAGACCAGTTAACCGAGGGGATGAAACTCCTGATAGAGGTGCTGCTGTTCCTAAGTTTGGTGAGTGGGATGAGAGTAATCCGGCATCAGCTGATGGCTATACACACATTTTCAACAAGGTTCGAGAGGAGAAACAAGGCGGCGGCGGACATGCTCCCGGCACTCCTACAAAGAGACCATATGTGGTCCGGAACCAAGCTGCTGATGACAAAGCCCAGAGTTGCTGTTTTGGGTGGTGCAGAAAATGA 627 0.4801 MINPNDPEENPDLDPNNSSSADLPPSKPRADLKEPAGKGSAKSSLELQKSLDSDPNDSFGSPARPGGQGVGSTDNRRRPSRQSAGSEYSIERSPLHRQARTPGRDSPSFEGKNPYDSSHGTPGRSRLRPVNRGDETPDRGAAVPKFGEWDESNPASADGYTHIFNKVREEKQGGGGHAPGTPTKRPYVVRNQAADDKAQSCCFGWCRK 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0788 208 MobiDBLite consensus disorder prediction 1 24 - -
Sto6g0788 208 MobiDBLite consensus disorder prediction 1 158 - -
Sto6g0788 208 MobiDBLite consensus disorder prediction 128 145 - -
Sto6g0788 208 MobiDBLite consensus disorder prediction 43 57 - -
Sto6g0788 208 PANTHER RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE-RELATED 1 205 - -
Sto6g0788 208 MobiDBLite consensus disorder prediction 73 89 - -
Sto6g0788 208 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 137 172 IPR008700 -
Sto6g0788 208 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 1 205 IPR040387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0788 Sto-Chr6 7910121 7911450 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0788 K13456 - gmx:100499219 292.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0788 6 7910121 7911450 Sto1g2488 1 32381687 32383942 CCT