Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0515 ATGGGAGAAGAGAGAGCCGTAGTAAAATGGCGCAAAATCCCCACTCTCAACACCTCTCACTGTGCCACCGACAACCTCGAACCgctatggaagaagaagaagaccagTCTCAGTCTCAGTCTCAGCGTCACTCCTTGTAAGTTCGCATGCGTTTCCGTGGCTGAAATGAAACTGCAAAAGGAGTTCTCGCCCACGCCGGCTCAGCTCTTGAAGCATCCGCTAGCTGTAGTCGCACTCGTGCCCAAAGACGCCGCGCTCTTCCTCGCCGGAGCCATCGCCGGCGCCGCTGCTAAGTCCGTCACGGCTCCGCTCGACCGTATCAAAATCCTTCTGCAGACTCATGGGGTGCGAGTTGGGCAAGAAAGTGCTAAGAAGGCAATTAATTTCATAGAGGCTGTAACAGTAATAGGGAAGGAAGAAGGCATTAAAGGTTACTGGAAGGGGAACCTCCCCCAGGTTATTCGGATTATTCCTTATAGTGCTGTCCAGCTGTTTGCTTATGAACTTTATAAGAAAATGTTCAGGGGAAAGGATGGCGAGCTCTCTGTTGTTGGAAGACTTGCAGCAGGTGCTTTTGCTGGAATGACATCCACTTTTATAACGTACCCATTAGATGTTCTGAGATTACGATTAGCAGTTGAACCAGGTTATCGAACTATGTCCGAGGTTGCGTTGAGCATGCTAAGAGAGGAGGGTTTCGCATCATTCTACTATGGCCTTGGGCCTTCTCTTATTTCAATAGCTCCTTATATTGCTGTGAACTTTTGTGTTTTTGACTTATTAAAGAAGTCTTTGCCAGAGAAGTATCAAAAGAGAACTGAAACGTCTCTAATAACGGCTGTGCTATCTGCATCTCTTGCCACAATTACATGCTATCCTCTGGACACAGTGCGAAGGCAGATGCAATTGAAGGGTACACCTTATAAGACAGTTTTAGATGCCCTTCCAGGTATTGTGGCAAGGGATGGAGTTATTGGCTTGTATCGGGGCTTTATAGCCAATGCTTTGAAAACCCTACCAAACAGCAGCATCAGGCTTACCACATACGACTTTGTTAAACGTATAATTGCGGCTAGTGAGAAAGAATTTCAAATGATTACAGAGGAAAATCGCCAGAAACAGAACAACACCAATGAACAATGTTGA 1146 0.4546 MGEERAVVKWRKIPTLNTSHCATDNLEPLWKKKKTSLSLSLSVTPCKFACVSVAEMKLQKEFSPTPAQLLKHPLAVVALVPKDAALFLAGAIAGAAAKSVTAPLDRIKILLQTHGVRVGQESAKKAINFIEAVTVIGKEEGIKGYWKGNLPQVIRIIPYSAVQLFAYELYKKMFRGKDGELSVVGRLAAGAFAGMTSTFITYPLDVLRLRLAVEPGYRTMSEVALSMLREEGFASFYYGLGPSLISIAPYIAVNFCVFDLLKKSLPEKYQKRTETSLITAVLSASLATITCYPLDTVRRQMQLKGTPYKTVLDALPGIVARDGVIGLYRGFIANALKTLPNSSIRLTTYDFVKRIIAASEKEFQMITEENRQKQNNTNEQC 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0515 381 ProSiteProfiles Solute carrier (Solcar) repeat profile. 181 264 IPR018108 -
Sto6g0515 381 Pfam Mitochondrial carrier protein 86 176 IPR018108 -
Sto6g0515 381 Pfam Mitochondrial carrier protein 180 267 IPR018108 -
Sto6g0515 381 Pfam Mitochondrial carrier protein 275 357 IPR018108 -
Sto6g0515 381 PRINTS Mitochondrial carrier protein signature 86 99 IPR002067 GO:0055085
Sto6g0515 381 PRINTS Mitochondrial carrier protein signature 99 113 IPR002067 GO:0055085
Sto6g0515 381 PRINTS Mitochondrial carrier protein signature 148 168 IPR002067 GO:0055085
Sto6g0515 381 PRINTS Mitochondrial carrier protein signature 196 214 IPR002067 GO:0055085
Sto6g0515 381 PRINTS Mitochondrial carrier protein signature 237 255 IPR002067 GO:0055085
Sto6g0515 381 PRINTS Mitochondrial carrier protein signature 280 302 IPR002067 GO:0055085
Sto6g0515 381 PANTHER ADP/ATP CARRIER PROTEIN 5 369 - -
Sto6g0515 381 SUPERFAMILY Mitochondrial carrier 84 352 IPR023395 -
Sto6g0515 381 Gene3D Mitochondrial carrier domain 83 367 IPR023395 -
Sto6g0515 381 ProSiteProfiles Solute carrier (Solcar) repeat profile. 271 355 IPR018108 -
Sto6g0515 381 ProSiteProfiles Solute carrier (Solcar) repeat profile. 81 173 IPR018108 -
Sto6g0515 381 Coils Coil 356 376 - -
Sto6g0515 381 PANTHER SOLUTE CARRIER FAMILY 25 5 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0515 Sto-Chr6 5594026 5599498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0515 1 375 Organic Solute Cotransporters AT3G51870 67.016 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0515 K14684 - gmx:100796878 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2275 1 30739074 30743146 Sto6g0515 6 5594026 5599498 CCT
Sto6g0515 6 5594026 5599498 Sto6g0515 6 5594026 5599498 ECH