Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0511 ATGGGCGATTTCAATCTCGCTCTCGTCATCGTCGCCATTGTCGTCTGCATCATCGTCTTCATCTTCAATGTCTACCTGCTCGTCAATTACCAGCACCCCGATGACGCCAACCAGGCCTACTTCCCCAAATTCGTCGTCGTTTTTGGTCTCTCCATCGCCGCGATTTCCATCCTTATGTTGCCGGCGGACGTGGCCAACCGGCAGGCGTGTCGGCATGCCTTGTATAATGGCGCCTGTCATCTCACCTTGCCGATGAAGGATCTGTGGCTCGCGGTCTACATTGTCGACGCTGTGCTCGTGTTCTTCATCATCCCCTTCTCTATGTTCTACTACGAAGGGGACCAAGACAAGACTATTGGCCAACGGGTTAAGAGCGCGCTGTGTTGGATGGTGACTACGGCTATTGTGTGCGCACTTGTTCTGGGTATCTTATATGGGCTGGTTGGGAAGGTGGACTTTACTGTTAGGCATCTTTCATCATCCACAACTTCATTTCCTAGCTCATGGGACTTCTCTAGTAGTCAACAATGTATTGGAAATGGTGTCCATCAGTGCTCTGCCTACTCTGCTAATGCTTCATCAGAGAAAACCTGGACCATGCGTACTACCTTTCCTGAATATGTTGTTGCACTTGCTACTATTGTTGGATCTGTCCTCTTTGCTATATTTGGCGGCGTTGGTATTGCTTGTCTGCCATTGGGacttatattttcatttatccGGCGTCCAAAGGCTGTTATTACTCGCTCACAGTATATCAAGGAAGCAACTGAACTGGGTAAAAAAGCAAGAGAATTGAAGAAAGCTGCTGAGGCCCTTCATCAGGAAGAAAGAAGTGGTTCAAAGGGTAGAAAATTTCGTAAGAATATAAAGTCAGTAGAAAAGGAGGTCTTTCAATTAGAAGAAGATGTAAAGCTTCTTGAAGAGATGTATCCACAAGGGGAAAAGGCTGAGACAGCATGGGCACTAACAGTTCTTGGGTATCTAGCAAAACTTGTGTTGGGAATTTTAGGGTTGATCGTTTCAGTGGCATGGATCGCTCATATCattatatatctattaattgATCCTCCGCTTTCTTCATTCCTGAATGAAGTTTTCATCAAGCTGGATGATATTTGGGGTCTTCTGGGTACTGCAGCATTTGCATTTTTCTGCTTCTACCTTCTCCTTGCTGTGATTGCGGGTGCTATGATGCTTGGGCTCCGACTAGTTTTCATTACTATTCATCCCATGAAGTGGGGAGCCACTCTGATGAACTCTTTCCTGTTTAATGTGGGGCTTATACTTCTTTGCTCCATTAGTGTTATCCAGTTCTGCTCCACAGCATTTGCCTACTATGCACAAGCCACTGCAGCACAGGAAATATTTGGCCACACTTTGCAGTCTCTTCGtggaattaaatatttatacaaGTACAACGTGTTTCAGATTGCTTTTGTTGTACTGGCTGGATtgacttttatatattatgctGCCTTTggatggaaaagaagaaagccaAGTGGCAAGTTCCAATTGTCTACATGA 1530 0.434 MGDFNLALVIVAIVVCIIVFIFNVYLLVNYQHPDDANQAYFPKFVVVFGLSIAAISILMLPADVANRQACRHALYNGACHLTLPMKDLWLAVYIVDAVLVFFIIPFSMFYYEGDQDKTIGQRVKSALCWMVTTAIVCALVLGILYGLVGKVDFTVRHLSSSTTSFPSSWDFSSSQQCIGNGVHQCSAYSANASSEKTWTMRTTFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSFIRRPKAVITRSQYIKEATELGKKARELKKAAEALHQEERSGSKGRKFRKNIKSVEKEVFQLEEDVKLLEEMYPQGEKAETAWALTVLGYLAKLVLGILGLIVSVAWIAHIIIYLLIDPPLSSFLNEVFIKLDDIWGLLGTAAFAFFCFYLLLAVIAGAMMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCSTAFAYYAQATAAQEIFGHTLQSLRGIKYLYKYNVFQIAFVVLAGLTFIYYAAFGWKRRKPSGKFQLST 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0511 509 Coils Coil 256 276 - -
Sto6g0511 509 PANTHER BNAC05G43630D PROTEIN 1 508 - -
Sto6g0511 509 PANTHER LIMR FAMILY PROTEIN DDB_G0283707-RELATED 1 508 - -
Sto6g0511 509 Coils Coil 290 310 - -
Sto6g0511 509 Pfam LMBR1-like membrane protein 266 487 IPR006876 -
Sto6g0511 509 Pfam LMBR1-like membrane protein 9 288 IPR006876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0511 Sto-Chr6 5569773 5575106 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0511 K14617 - gmx:100816750 909.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0511 6 5569773 5575106 Sto1g2270 1 30691040 30696826 CCT
Sto6g0511 6 5569773 5575106 Sto6g0511 6 5569773 5575106 ECH