Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2270 ATGGGCGATTTCAATCTCGCTCTCGTAATTGTCGCCATAGTCGTATGTGTAATTGTCTTCATCTTCAATGTCTACCTGCTTGTCAATTACCAGCACCCTGATGATGCCAACCAGGCCTACTTCCCCAAATTCATTGTTGTTTTTGGGCTGTCTATTGCCGCGATTTCCATATTGATGTTACCGGCCGATGTGCCGATGAAGGATCTGTGGCTTTCTGTCTACATTGTCGATGCTATCCTGGTGTTCTTCGTCATCCCCTTCGCTATGTTCTACTACGAAGGAGACTTAGACAATGTTGGTAAACGGATAAAGAGTGCACTGCTGTGGATGGTAACAACAGCTATCGTGTGCGCTCTGGTTCTGGGAATTTTATATGGGCTTGTTGGGAAGGTGGACTTTACTGTTAGACATCTCTCTTCGTCCACAGTTGCATTTCCTAGCTCATGGGACTTCAGTAGTGGTCAACAATGTATTGGAAGTGGTGACCGTCAGTGCTCTGCATACACTGCTAGTCCTTCATCAGAGAAAACATGGACCATGCGAACTACATTTCCAGAATATGTCGTCGCTCTTGCTACTATTGTTGGATCTGTTCTCTTTGCTATATTTGGTGGCGTTGGTATTGCTTGTCTTCCATTGGGACTCATATTTTCATTCATTCGGCGCCCAAAGGCCGTTATCACTCGTTCCCAGTATATAAAGGAAGCAACTGAACTGGGCAAAAAagcaaaagaactgaagaaaaCAGCTGAGTCACTTCATCAGGAAGAAAGAAGTGGTTCAAAGGGtagaaaattttgtaaaaatgtGAAGGCACTAGAAAAGGAGTTGTTTCAATTGGAAGAAGATGTAAAACTTCTTGAAGAGATGTACCCCCAAGGGGAAAAGGCTGAGACAGCGTGGGCACTAACAATTCTTGGGTATCTGGCAAAACTTGTGTTGGGAATTTTAGGTCGGGCTGAGAGCCTGAGACTGGTTTTCATTACTATACATCCCATGAAGTGGGGAGCCACTTTGATGaactcttttctgtttaatGTGGGGCTTATCCTTCTCTGTTCCATTAGTGTGATCCAATTCTGCTCCATAGCATTTGCATACTATGCTCAAGCGACTGCAGCACAGGAAATATTTGGCCACACTTTGCAGTCTCTTCAtggaataaaatatttatacaaGTACAACGTATTTCAGATTGCGTTTGTTGTTTTGGCTGGATTGACCTTTGTGTATTATGCTGCCTTTggatggagaagaagaaaaccTAGTGGCAAGTTCCAATTGTCTACATGA 1293 0.4122 MGDFNLALVIVAIVVCVIVFIFNVYLLVNYQHPDDANQAYFPKFIVVFGLSIAAISILMLPADVPMKDLWLSVYIVDAILVFFVIPFAMFYYEGDLDNVGKRIKSALLWMVTTAIVCALVLGILYGLVGKVDFTVRHLSSSTVAFPSSWDFSSGQQCIGSGDRQCSAYTASPSSEKTWTMRTTFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSFIRRPKAVITRSQYIKEATELGKKAKELKKTAESLHQEERSGSKGRKFCKNVKALEKELFQLEEDVKLLEEMYPQGEKAETAWALTILGYLAKLVLGILGRAESLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCSIAFAYYAQATAAQEIFGHTLQSLHGIKYLYKYNVFQIAFVVLAGLTFVYYAAFGWRRRKPSGKFQLST 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2270 430 Coils Coil 236 256 - -
Sto1g2270 430 PANTHER LIMR FAMILY PROTEIN DDB_G0283707-RELATED 64 319 - -
Sto1g2270 430 PANTHER LIMR FAMILY PROTEIN DDB_G0283707-RELATED 1 64 - -
Sto1g2270 430 PANTHER LIMR FAMILY PROTEIN DDB_G0283707-RELATED 322 429 - -
Sto1g2270 430 Coils Coil 270 290 - -
Sto1g2270 430 Pfam LMBR1-like membrane protein 9 273 IPR006876 -
Sto1g2270 430 PANTHER BNAC05G43630D PROTEIN 1 64 - -
Sto1g2270 430 PANTHER BNAC05G43630D PROTEIN 322 429 - -
Sto1g2270 430 PANTHER BNAC05G43630D PROTEIN 64 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2270 Sto-Chr1 30691040 30696826 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2270 K14617 - gmx:100800757 692.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0511 6 5569773 5575106 Sto1g2270 1 30691040 30696826 CCT
Sto1g2270 1 30691040 30696826 Sto1g2270 1 30691040 30696826 ECH