Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0468 ATGGCTCTTGCTTCTTCCAAAGTTTCCTCTCTTTTCCTCTCGTCCATTGTCGGGGATACTCTGAAAAACCccatttcttcatcatcttcttctttgagCTTTGCTCTCTCCttgccttcttcttctctgagtCTTGTTCCTAAGGCTGGAGGGAGCAGGAATTTCAGGGTTTACGCATCGTCGTCGGGTACGAATTACCCGGCGCTCACCGGCGTCATATTCGAGCCGTTTGAGGAGGTGAAGAAGGAGGTTCTGGCTGTTCCGATTTCGCCTCAGGTTTCCATGGCTCGTCAGAACTATGCCGATGAGTGTGAAGCTGCGATTAATGAGCAGATTAATGTGGAATACAACGTTTCCTATGTGTACCACTCCTTGTTTGCATACTTTGACAGGGACAACGTGGCTCTCAAAGGCCTTGCAAAGTTCTTCAAGGAAGcaagtgaagaagaaagagaacaTGCTGAAAAGCTAATGAAATTTCAGAATATTCGTGGTGGACGTGTGATGCTTTACCCCATCAAGAATCCCCCCTCTGAATATGATCACGTGGAAAAGGGTGATGCCTTGTACGCTATGGAGTTAGCTTTGTCTTTGGAGAAGCTAACCAATGAGAAACTTCTGCATGTCCACAGTGTGGCAGATCGCAACAATGATCCTCAGATGGCTGACTTCATTGAGAGCGAGTTTTTAACTGAGCAGGTTGAAGCTATTAAGAAGATAGCAGAGTATGTGGCTCAACTGAGAATGGTTGGAAAGGGTCATGGTGTTTGGCATTTCGATCAAAGGCTTCTTCATGAAGGAGATGCTCTGTGA 813 0.4268 MALASSKVSSLFLSSIVGDTLKNPISSSSSSLSFALSLPSSSLSLVPKAGGSRNFRVYASSSGTNYPALTGVIFEPFEEVKKEVLAVPISPQVSMARQNYADECEAAINEQINVEYNVSYVYHSLFAYFDRDNVALKGLAKFFKEASEEEREHAEKLMKFQNIRGGRVMLYPIKNPPSEYDHVEKGDALYAMELALSLEKLTNEKLLHVHSVADRNNDPQMADFIESEFLTEQVEAIKKIAEYVAQLRMVGKGHGVWHFDQRLLHEGDAL 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0468 270 CDD Euk_Ferritin 102 261 - -
Sto6g0468 270 Coils Coil 144 164 - -
Sto6g0468 270 SUPERFAMILY Ferritin-like 88 265 IPR009078 -
Sto6g0468 270 PANTHER FERRITIN-2, CHLOROPLASTIC 40 268 - -
Sto6g0468 270 ProSitePatterns Ferritin iron-binding regions signature 1. 149 167 IPR014034 -
Sto6g0468 270 Gene3D - 67 267 IPR012347 -
Sto6g0468 270 ProSiteProfiles Ferritin-like diiron domain profile. 98 251 IPR009040 -
Sto6g0468 270 PANTHER FERRITIN 40 268 IPR001519 GO:0006826|GO:0006879|GO:0008199
Sto6g0468 270 Pfam Ferritin-like domain 106 250 IPR008331 GO:0008199
Sto6g0468 270 ProSitePatterns Ferritin iron-binding regions signature 2. 218 238 IPR014034 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0468 Sto-Chr6 5098230 5100453 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0468 K00522 - gmx:100778273 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0468 6 5098230 5100453 Sto1g2184 1 29986399 29989251 CCT
Sto6g0468 6 5098230 5100453 Sto6g0468 6 5098230 5100453 ECH
Sto6g0468 6 5098230 5100453 Sto9g2208 9 25723224 25723790 ECH