Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2184 ATGAGTAGTGGAGTGGATCGGCCACGAGCTCGGCACACGCCCGAACATGTAACTCAATCACTACCGTCCACGTGTTCTGAATCGACGGTCCATACAGAAATCTGGAACTCCTTGAATGCTCTCGCGCCACCATTATACTTCCAAATTCTTCCATTCGTGCCTAAAATGGCTCTTGCACCATCCAAAGTTTGTTCCTTTTCTCTTCAACCAGTTCTTGGGGATGGCCTCAGAAGAAAGAACACTTGTTCTAATTCTTCCCTGTGTCTAGCTAAGATCAGAGGAAGCAGGGGAAGTTTCATGGTGAAAGCATCACCTGAACCGAATTCTTCGGTGGCTTCTGTGATATTCGAACCGTTTGAGGAGATCAAGAAGGATTTTCTTGCTGTTCCTCTAGCACCTCAAGTTTCCATGGCTCGTCTCAACTATGAAGATGAGTGTGAAGCTGCACTTAATGAGCAGATAAATGTGGAATACAACGTTTCCTATGTGTACCATTCCATGTATGCATACTTCGGTAGGGACAACATTGCTCTGAGGGGACTTTCCAAGTTTTTCAAGGAATcaagtgaagaagaaagagagcatGCTGAAAAGCTTATGAAATATCAGAACATTCGTGGTGGACGAGTGTTACTTCATGCCATCAAGAATCCCCCTTCTGAATTCGAGCATAACGAGAAGGGGGATGCATTGTATGCTATGGAATTGGCTCTGTCTTTAGAGAAGTTAACGAACGAGAAACTTCTGAATGTGCACAGCGTGGCAGACCGCAACAAGGATCCTGAGTTGGCACACTTCATTGAGAGCGAATATTTGGACGAGCAGGTTGAAGCAATTAAGAAGATAGCAGAGTACGTGGCTCAACTGAGAATGGTTGGAAAGGGCCACGGAAGTGAATGTGAATTGCTAGAAGAACATGTAGAAAGTACAAGTGGAAgctaa 942 0.4363 MSSGVDRPRARHTPEHVTQSLPSTCSESTVHTEIWNSLNALAPPLYFQILPFVPKMALAPSKVCSFSLQPVLGDGLRRKNTCSNSSLCLAKIRGSRGSFMVKASPEPNSSVASVIFEPFEEIKKDFLAVPLAPQVSMARLNYEDECEAALNEQINVEYNVSYVYHSMYAYFGRDNIALRGLSKFFKESSEEEREHAEKLMKYQNIRGGRVLLHAIKNPPSEFEHNEKGDALYAMELALSLEKLTNEKLLNVHSVADRNKDPELAHFIESEYLDEQVEAIKKIAEYVAQLRMVGKGHGSECELLEEHVESTSGS 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2184 313 MobiDBLite consensus disorder prediction 1 24 - -
Sto1g2184 313 Pfam Ferritin-like domain 148 292 IPR008331 GO:0008199
Sto1g2184 313 PANTHER FERRITIN 57 298 IPR001519 GO:0006826|GO:0006879|GO:0008199
Sto1g2184 313 PANTHER FERRITIN-2, CHLOROPLASTIC 57 298 - -
Sto1g2184 313 ProSitePatterns Ferritin iron-binding regions signature 1. 191 209 IPR014034 -
Sto1g2184 313 ProSiteProfiles Ferritin-like diiron domain profile. 140 293 IPR009040 -
Sto1g2184 313 CDD Euk_Ferritin 144 298 - -
Sto1g2184 313 ProSitePatterns Ferritin iron-binding regions signature 2. 260 280 IPR014034 -
Sto1g2184 313 SUPERFAMILY Ferritin-like 132 297 IPR009078 -
Sto1g2184 313 Gene3D - 109 307 IPR012347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2184 Sto-Chr1 29986399 29989251 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2184 K00522 - gmx:547698 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0468 6 5098230 5100453 Sto1g2184 1 29986399 29989251 CCT
Sto1g2184 1 29986399 29989251 Sto1g2184 1 29986399 29989251 ECH
Sto1g2184 1 29986399 29989251 Sto9g2208 9 25723224 25723790 ECH