Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0445 ATGGAGCCTACCACAGGCAAGCCTAGCTTTCTCAGGAACGTTCTTACACGGTTGCTTCTGTTCGGCGTTTTCATTATAGTTGCTCGCTTTGCTTACATCATCACCATCGCCGGCGAGTCCTGCAATGTCGGCGACTTCTGCTTCTTCTCCCTTCCGGAGACTCTCAACTTTGTGATAGCCGGCGGCGGCGCCGGAGCTTTGGCCGTCGAGTCGAACGACGCCGTCGAGGTGTATGTTAGCAAAGATTGGGTCAGGGCCGTGCATTTCTACTCCTCCGTGTTTCAAGATCTGATCTCCGACGGCTATCTCTCGCCGGAGTCGAAGTCGCTCTGCGTAGAGACGCCGACTGGTCACGACGTTTTCGCTTTGAAGGAGATCGGCGTTTCGGACTCGATTGGGATTTCGAAGAAAGCTTCGAAGCCATTGGTGAAAGCAGGTCTGGCTCATCGTATGCCCTTTCGCAATAACACATTCGACTTCATCTTTTCCGGCGAGGGTGGGCTCGAGAAATCGGCGCGATCGGCAGATTTCGCCTCTGAGATCGCTCGGACGCTGAAACCCGAAGGGTTTGTGGTGTTCCATATAAAGGCTACAGATACGTATAGTTTCCATTCATTCCTTGATTTGTTTAATAATTTCAAAGTAGTGAAATGGCATGATATAGATGGGTTTGATTCTTCAATGCCTTCTATAAGAGAAATTGTTCTGAGGAAAGAGTTTGATGGCATTGGTCATGAGTTTGAGAATTTTGATGATGATTCCACTGGAAAATGTTCTTCTCATGGGTATAAACAAGAACTGGTTAAGAATGCGGAGCCTTTAATTCCTGAGGAGCCACTGAAGCCTTGGATTACTTTGAAGAGGAATATAAAGAACATAAAGTACCTTCCATCCATGGTTGATATAAGCTACAAGAATAAGTATGTGTACGTGGATGTTGGAGCTAGAAGTTACGGCTCTAGCATAGGAAGTTGGTTTAGGAAGCAATATCCAAAACAGAACAAGACCTTTCATGTTTATGCAATTGAGGCTGATAAAACTTTCCATCAAGAGTATGGTTTGAAAAAGGGGATTACCTTGCTGCCTTATGCTGCTTGGGTGAAGAATGAGACCTTAACATTTGAAATTCATCATGATCCTGGTGAACATGTTGAAGTTAAAGGTAGAGGCATGGGTAGGATTCAGCCATTGCAGTCATCATCATCCGATGGTTTTGATGGTGAAGTAGAGAAGATCCAAGGGTTTGATTTTGCAAACTGGTTGAAGAACACAGTGTCAAAGAATGATTTTGTTGTGATGAAGATGGATGTGGAAGGTACTGAATTCGATCTGATTCCGCGATTGTTTGAAACTGGAGCTATCTGTTTGGTGGACGAGATTTTTCTTGAATGCCACTATAATAGGTGGCAAAGATGTTGCCCTGGTCAGAGGAGTCCGAAGTATGAGAAGACTTATGATCAATGCTTGGAGCTCTTCACTACTCTTAGGCAAAGTGGAGTTCTTGTTCATCAATGGTGGTAA 1521 0.4484 MEPTTGKPSFLRNVLTRLLLFGVFIIVARFAYIITIAGESCNVGDFCFFSLPETLNFVIAGGGAGALAVESNDAVEVYVSKDWVRAVHFYSSVFQDLISDGYLSPESKSLCVETPTGHDVFALKEIGVSDSIGISKKASKPLVKAGLAHRMPFRNNTFDFIFSGEGGLEKSARSADFASEIARTLKPEGFVVFHIKATDTYSFHSFLDLFNNFKVVKWHDIDGFDSSMPSIREIVLRKEFDGIGHEFENFDDDSTGKCSSHGYKQELVKNAEPLIPEEPLKPWITLKRNIKNIKYLPSMVDISYKNKYVYVDVGARSYGSSIGSWFRKQYPKQNKTFHVYAIEADKTFHQEYGLKKGITLLPYAAWVKNETLTFEIHHDPGEHVEVKGRGMGRIQPLQSSSSDGFDGEVEKIQGFDFANWLKNTVSKNDFVVMKMDVEGTEFDLIPRLFETGAICLVDEIFLECHYNRWQRCCPGQRSPKYEKTYDQCLELFTTLRQSGVLVHQWW 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0445 506 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 294 446 IPR029063 -
Sto6g0445 506 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 145 224 IPR029063 -
Sto6g0445 506 Gene3D Vaccinia Virus protein VP39 132 256 IPR029063 -
Sto6g0445 506 Pfam Methyltransferase domain 144 193 IPR013216 GO:0008168
Sto6g0445 506 Gene3D Vaccinia Virus protein VP39 294 470 IPR029063 -
Sto6g0445 506 PANTHER METHYLTRANSFERASE 1 506 - -
Sto6g0445 506 PANTHER METHYLTRANSFERASE 1 506 - -
Sto6g0445 506 Pfam Methyltransferase FkbM domain 312 486 IPR006342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0445 Sto-Chr6 4912449 4913999 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0445 - - thj:104816178 785.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0445 6 4912449 4913999 Sto1g2162 1 29847007 29848551 CCT
Sto6g0445 6 4912449 4913999 Sto6g0445 6 4912449 4913999 ECH