Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2162 ATGGAGCCTACCGCAGGAGGCAAGTCCGGTTTTCTCAGGAATGTTCTGGTACGGTTGCTTCTGTTTGGCGTCTTTATCATAATCGTTCGATTCGCTTACGTCATAACCATCGCCGGGGAGTCTTGCACCGTCGGCGACTTCTGTTTCTTCTCCGTGCCGGAGAGTCTCAATTTCGCTGTCTCCGGACCTGGCTCCGGCGGTGGCGCTCTGTACACCAGCAAGGATTGGATCAAGGCCGTTCAGTTCTACTCTTCCGCGTTCCAAGATCTGATTTCCGCAGGCTACCTCACGCCGGAGTCGAAATCGTTGTGCGTTGAGACGCCGACGGGTCGCGACGTCTTCGCCTTGAAGGAGATTGGCGTTTCGGATTCCATCGGAATCTCGAAGAGAGCTTCGAAGCCTCTGGTGAAAGCCGGTGAAGCTCATCGGATTCCGTTTGGCGATAACACGTTTGACTTCGTCTTCTTCGGCGAGGGCGGGCTGGACAGATCGTCACGGCCGTCGGAAGTTGCTTCTGAGATTGTTCGGACGCTTAAACCCGAAGGGTTTGCGGTGTTCCACGTGAAGGCTAAAGATACTTACAGTTTCAATTCATTCCTTGATTTGTTTGGTTGTTGCAGAGTAGTGAAATCGCACGATATAGATGGATTCAATTCTTCAATGCCTTTTATACGTGAAATTGTTGTTAGAAAAGACTCTGATGGTGCTATTGTTCATGAAAATGTGAATCAGAACTCAAATGGCACTTGTTCTGTCTCAGGGTATAAACAAGAATTTGTTAGGCAAGCAGAGCCTCTGATAGCTGAGGAGCCACTGAAGCCATGGATAACTTTGAAGAGGAATATAAGGAACATCAAGTACCTTCCATCAATGGTGGACATAAGCTTTAAGAATAGGTATGTCTATGTGGATGTAGGAGCTAGAAGCTATGGCTCTAGTATAGGAAGTTGGTTTAGGAAACAGTATCCAAAACAGAACAAGACCTTCCATGTGTATGCAATTGAAGCTGATAAAACTTTTCACCAAGAGTACGGATTGAAAAAGGGAATCACATTGCTACCCTATGCAGCTTGGGTGAAGAATGAAACATTAACGTTTGAAATCACTAGAGACCCAGGTAAGAAAGTAGAAGAAGTGAAAGGTAGAGGAATGGGTAGGATTCAACCTGTGCAATCTGCAGGTGGGTTTGATGGTGAAGTGGAGATCATCCAAGGGTTTGATTTTGCAGATTGGTTGAAGAACACAGTTTCAAAGAAGGATTTTGTGGTGATGAAAATGGATGTGGAAGGTACTGAGTTTGATCTGATTCCGAGGTTGTTTGAAACTGGGGCTATCTGTTTGGTAGATGAGATTTTTCTGGAATGCCATTATAATAGGTGGCAGAGATGTTGCCCTGGGCAGAGGAGTTCCAAGTATGAGAAAACATATGATCAATGCTTGGATCTCTTCAAATCTCTTAGACGAAGTGGAGTTCTGGTTCATCAATGGTGGTGA 1494 0.4572 MEPTAGGKSGFLRNVLVRLLLFGVFIIIVRFAYVITIAGESCTVGDFCFFSVPESLNFAVSGPGSGGGALYTSKDWIKAVQFYSSAFQDLISAGYLTPESKSLCVETPTGRDVFALKEIGVSDSIGISKRASKPLVKAGEAHRIPFGDNTFDFVFFGEGGLDRSSRPSEVASEIVRTLKPEGFAVFHVKAKDTYSFNSFLDLFGCCRVVKSHDIDGFNSSMPFIREIVVRKDSDGAIVHENVNQNSNGTCSVSGYKQEFVRQAEPLIAEEPLKPWITLKRNIRNIKYLPSMVDISFKNRYVYVDVGARSYGSSIGSWFRKQYPKQNKTFHVYAIEADKTFHQEYGLKKGITLLPYAAWVKNETLTFEITRDPGKKVEEVKGRGMGRIQPVQSAGGFDGEVEIIQGFDFADWLKNTVSKKDFVVMKMDVEGTEFDLIPRLFETGAICLVDEIFLECHYNRWQRCCPGQRSSKYEKTYDQCLDLFKSLRRSGVLVHQWW 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2162 497 Pfam Methyltransferase FkbM domain 304 463 IPR006342 -
Sto1g2162 497 Gene3D Vaccinia Virus protein VP39 284 462 IPR029063 -
Sto1g2162 497 PANTHER METHYLTRANSFERASE 1 497 - -
Sto1g2162 497 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 286 455 IPR029063 -
Sto1g2162 497 Gene3D Vaccinia Virus protein VP39 122 239 IPR029063 -
Sto1g2162 497 PANTHER METHYLTRANSFERASE 1 497 - -
Sto1g2162 497 Pfam Methyltransferase domain 136 186 IPR013216 GO:0008168
Sto1g2162 497 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 136 196 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2162 Sto-Chr1 29847007 29848551 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2162 - - zju:107431288 760.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0445 6 4912449 4913999 Sto1g2162 1 29847007 29848551 CCT
Sto1g2162 1 29847007 29848551 Sto1g2162 1 29847007 29848551 ECH