Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0436 ATGGTTGCAGCTGAAGTATTCCCCGATACAACCCTTCAGTCTCAGCCTCAGGCAATTCCTATAATGTCCAGAGACAACACTTTCCCTCCAAGGAGATTAGAAGGCAAAGTGGCTATAGTTACGGGAGGAGCAAGAGGAATAGGCGAAGCAACCGCAAGAATCTTCAAGAAGCACAAGAGCATCTTGGACTTCGACGCGCAGGAGTTCGAGCGCGTGATGGGAGTGAACGTGAAGGGCGTGGCGCTGGGGATGAAACACGCGGCCAGGGCGATGATCCCGAGGCGTCGCGGGTGCATAATATCGACGGCGAGCGTGGCGGGAGTCACGGGTGGGCTTGGGCCCCACGCGTACACGGCGTCCAAGCACGCGATTGTTGGGCTGACGAAAAACGCGGCGTGCGAGTTGGGGAGATATGGGATTAGAGTAAATTGTGTTTCGCCATTTGGGGTGGCGACTTCCATGCTTGTGAATGCATGGAGAGGGaatgaggaagaagaggaagagggagGGAGTGGAAGTTTTGGTGGGTTGCCTATGGAAGAGGAAGTGGAGAAGATGGAAGAGTTTGTGAGAGGAATGGCGAATTTGAAAGGAAGCACTTTGAGGGGAAAGGATATTGCAGAGGCAGCACTTTATCTTGCTAGTGATGAATCAAAGTATGTTAGTGGTCATAACCTTGTTGTGGACGGTGGAATTACCTCCTCAACAAATCTTGTGGgcttgtaa 726 0.5 MVAAEVFPDTTLQSQPQAIPIMSRDNTFPPRRLEGKVAIVTGGARGIGEATARIFKKHKSILDFDAQEFERVMGVNVKGVALGMKHAARAMIPRRRGCIISTASVAGVTGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCVSPFGVATSMLVNAWRGNEEEEEEGGSGSFGGLPMEEEVEKMEEFVRGMANLKGSTLRGKDIAEAALYLASDESKYVSGHNLVVDGGITSSTNLVGL 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0436 241 Gene3D - 5 57 - -
Sto6g0436 241 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 2A-LIKE 56 241 - -
Sto6g0436 241 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 2A-LIKE 19 58 - -
Sto6g0436 241 PRINTS Glucose/ribitol dehydrogenase family signature 37 54 IPR002347 -
Sto6g0436 241 PRINTS Glucose/ribitol dehydrogenase family signature 117 136 IPR002347 -
Sto6g0436 241 PRINTS Glucose/ribitol dehydrogenase family signature 138 155 IPR002347 -
Sto6g0436 241 PRINTS Glucose/ribitol dehydrogenase family signature 196 216 IPR002347 -
Sto6g0436 241 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 31 233 IPR036291 -
Sto6g0436 241 Pfam Enoyl-(Acyl carrier protein) reductase 56 163 - -
Sto6g0436 241 Pfam Enoyl-(Acyl carrier protein) reductase 183 233 - -
Sto6g0436 241 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 19 58 - -
Sto6g0436 241 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 56 241 - -
Sto6g0436 241 Gene3D - 58 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0436 Sto-Chr6 4822243 4824060 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0436 61 232 Acyl Lipid Metabolism Gene Families AT1G24360 28.488 1.27e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0436 - - tcc:18597431 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2156 1 29782452 29785643 Sto6g0436 6 4822243 4824060 CCT
Sto6g0436 6 4822243 4824060 Sto6g0436 6 4822243 4824060 ECH