Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2156 ATGCGCGTCAACGTCAAAGGCGTGGCTCTAGGGATGAAACACGCCGCGAGGGCGATGATTCCGAGGCGGTGCGGGTGTATTATATCCACCGCCAGCGTTGCTGGGCttatgggcgggcttgggcctCACGCGTATACGGCCTCGAAGCATGCGATTGTTGGGCTGACGAAGAACGCGGCCTGCGAGTTGGGGAAGTATGGGATTAGAGTGAACTGTATTTCGCCATTTGGAGTGGCGACTTCCATGCTTGTGAATGCTTGGAGAAAAGAagacgatgatgaagaagaagaagggaatgTGAGTTTTGGGATGCCATTAGAAGAGGAAGTGGAGAAAACAGAAGAGTTTGTGAGGGGATTGGCTAATTTGAAAGGAGCAACTTTGAAGGCTAGGGATATTGCAGAGGCAGCACTTTATCTTGCAAGTGATGAATCCAAGTATGTTAGTGGTCATAATTTGGTTGTGGATGGTGGAATTACCTCCTCAAGAAATTGTGTTGGcttTTTTGTAGCCATATCACTCCATCAGGCATCAAGCACTTCAAATTAG 549 0.439 MRVNVKGVALGMKHAARAMIPRRCGCIISTASVAGLMGGLGPHAYTASKHAIVGLTKNAACELGKYGIRVNCISPFGVATSMLVNAWRKEDDDEEEEGNVSFGMPLEEEVEKTEEFVRGLANLKGATLKARDIAEAALYLASDESKYVSGHNLVVDGGITSSRNCVGFFVAISLHQASSTSN 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2156 182 Pfam Enoyl-(Acyl carrier protein) reductase 1 160 - -
Sto1g2156 182 PRINTS Glucose/ribitol dehydrogenase family signature 19 35 IPR002347 -
Sto1g2156 182 PRINTS Glucose/ribitol dehydrogenase family signature 45 64 IPR002347 -
Sto1g2156 182 PRINTS Glucose/ribitol dehydrogenase family signature 66 83 IPR002347 -
Sto1g2156 182 PRINTS Glucose/ribitol dehydrogenase family signature 123 143 IPR002347 -
Sto1g2156 182 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 160 IPR036291 -
Sto1g2156 182 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 1 167 - -
Sto1g2156 182 Gene3D - 1 165 - -
Sto1g2156 182 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 2A 1 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2156 Sto-Chr1 29782452 29785643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2156 3 159 Acyl Lipid Metabolism Gene Families AT1G24360 29.747 4.51e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2156 - - tcc:18597433 286.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2156 1 29782452 29785643 Sto6g0436 6 4822243 4824060 CCT
Sto1g2156 1 29782452 29785643 Sto1g2156 1 29782452 29785643 ECH