Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0373 ATGAATGAGCCTCGATGCACCTCAGATCCCTCAGGCGACAAATTACAGGATTGGATTCAAGAAATGGCCGTCTATGTGAAAAGCATTGATCCAAAACACCTAGTGGAGATTGGGTTGGAAGGATTTTATGGCCCCTCCACACCTCAGAGGTTTCAGTTCAATCCAAATACATATGCTCAACTGGTTGGGACTGATTTTGTGAGGAACCATCAGGTTCTTGGGGTAGACTTTGCTTCTGTTCACATATATGCAGACTCTTGGATTTCACAAGCAATTTCTGACAACCACCTCCCATTTATAAAATCTTGGATGGAAGCTCACATAGAGGATGCTGAGAAGTATCTAGAAATGCCTGTTATTTTTGCTGAGTTTGGTGTATCTGCAAAAGATCCTGGCTTCAATTCATCATTCAGGAACACACTTATAAACACAGTGTACAAGACAATCTTAAACTCTACGAAGAAAGGAGGGAGTGGGGCTGGAAGCCTTTTGTGGCAGCTCTTTCCTGATGGAACAGATTATATGGATGATGGGTATGCAATTGTTCTCTCAAAATCTCCTTCCACCTCAAGCATTATATCCCTTCAATCCACAAGGCTTGCTCTATTCAACTCTATGTGTTCTTGGAGATGCCATTGGAGTTGTAATAAGAAACATGTAATGGAAAAAATACTCTATTATGATGAACTCTAA 693 0.4098 MNEPRCTSDPSGDKLQDWIQEMAVYVKSIDPKHLVEIGLEGFYGPSTPQRFQFNPNTYAQLVGTDFVRNHQVLGVDFASVHIYADSWISQAISDNHLPFIKSWMEAHIEDAEKYLEMPVIFAEFGVSAKDPGFNSSFRNTLINTVYKTILNSTKKGGSGAGSLLWQLFPDGTDYMDDGYAIVLSKSPSTSSIISLQSTRLALFNSMCSWRCHWSCNKKHVMEKILYYDEL 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0373 230 SUPERFAMILY (Trans)glycosidases 1 189 IPR017853 -
Sto6g0373 230 Gene3D Glycosidases 1 203 - -
Sto6g0373 230 Pfam Cellulase (glycosyl hydrolase family 5) 1 132 IPR001547 GO:0004553|GO:0071704
Sto6g0373 230 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 1 230 - -
Sto6g0373 230 PANTHER - 1 230 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0373 Sto-Chr6 4193181 4195349 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0373 1 230 Glycoside Hydrolase AT5G01930 68.966 1.34e-124 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0373 K19355 - gmx:100801139 407.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0373 6 4193181 4195349 Sto1g1781 1 26004171 26010134 CCT
Sto6g0373 6 4193181 4195349 Sto6g0373 6 4193181 4195349 ECH