Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1616 ATGGCTGCCTCCCTTTCCTCTGTAGGAGCAGTCAACAGAACTCCACTGAGCATCAATGGGTCTGGAGCTGGAGCTTCAGTTCCCAGCACAGCCTTCATGGGGACAAGCTTGAAGAAGGTGGTTGCCTCAAGGTTTCCCAACGCCAAGGTTTCCTCAGGAAGCAGCTTTAAGGTTGTTGCCCAAGAGAAGGAGATTGATGAGAAAAAGCAGACGGACGGAGACAAATGGAGGGGTTTAGCCTATGATGTTTCAGATGACCAACAAGACATCACAAGAGGGAAGGGTATGGTGGATTCCCTCTTCCAAGCTCCCCAGCAAGCTGGAACTCACTACGCTGTCATGAGCTCCTATGAGTACCTCAGTCAGGGTCTTCGCACGTACAACCTTGACAACAACATGGATGGCTTTTACATTGCTCCTGCTTTCATGGACAAGCTTGTTGTTCACATCACCAAGAACTTCATGACCCTGCCCAACatcaagGTTCCTCTTATCCTTGGTATCTGGGGAGGCAAAGGTCAAGGGAAATCTTTCCAATGTGAGCTTGTCTTTGCCAAGATGGGAATCAACCCCATCATGATGAGCGCCGGAGAACTAGAAAGCGGAAACGCCGGAGAACCAGCGAAGCTAATCAGACAGAGGTACCGTGAAGCCGCCGACATAATCAGGAAGGGAAAGATGTGCTGCCTCTTCATCAACGATCTCGACGCCGGAGCTGGTCGCATGGGCGGAACCACACAGTACACCGTCAACAACCAGATGGTGAACGCCACACTCATGAACATCGCCGACAACCCTACCAACGTTCAGCTCCCCGGAATGTACAACAAGGAGGAGAACGCTCGCGTGCCCATCATCGTCACCGGTAACGACTTCTCGACTCTTTACGCCCCTCTCATCCGTGACGGGCGTATGGAGAAATTCTACTGGGCGCCCACCAGGGATGACCGGATCGGTGTGTGTAAGGGGATCTTCCGTACCGATGGCGTTCCCGATGAGGACGTCGTGAAGATCGTCGATACCTTCCCCGGCCAATCCATCGATTTCTTTGGAGCACTGAGGGCGAGAGTGTACGACGATGAAGTGAGGAAGTGGATTGCGGGAGTTGGAGTAGAAGGAGTGGGGAAGAAGCTTGTGAACTCAAAAGAAGGGCCTCCGAGCTTCGAGCAGCCAAAGATGACAGTGGATAAGCTGCTGGAGTATGGATTCATGCTGGTGAACGAGCAAGAGAATGTGAAGAGAGTCCAATTGGCTGACAAGTATTTGAATGAAGCTGCTCTTGGTGATGCCAATCAAGATGCTATCAAGAGAGGATCTTTCTATGGTTAG 1329 0.5139 MAASLSSVGAVNRTPLSINGSGAGASVPSTAFMGTSLKKVVASRFPNAKVSSGSSFKVVAQEKEIDEKKQTDGDKWRGLAYDVSDDQQDITRGKGMVDSLFQAPQQAGTHYAVMSSYEYLSQGLRTYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFRTDGVPDEDVVKIVDTFPGQSIDFFGALRARVYDDEVRKWIAGVGVEGVGKKLVNSKEGPPSFEQPKMTVDKLLEYGFMLVNEQENVKRVQLADKYLNEAALGDANQDAIKRGSFYG 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1616 442 Pfam ATPase family associated with various cellular activities (AAA) 168 309 IPR003959 GO:0005524|GO:0016887
Sto5g1616 442 Gene3D - 313 425 - -
Sto5g1616 442 PANTHER - 1 442 IPR044960 -
Sto5g1616 442 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 338 IPR027417 -
Sto5g1616 442 Gene3D - 128 312 IPR027417 -
Sto5g1616 442 PANTHER ATPASE, AAA-TYPE, CORE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 1 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1616 Sto-Chr5 11311222 11314782 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1616 - - gmx:100806240 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2366 1 31544167 31547170 Sto5g1616 5 11311222 11314782 ECH
Sto5g1616 5 11311222 11314782 Sto5g1616 5 11311222 11314782 ECH