Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2366 ATGGCTACTTCAGTCTCAACTGTCGGCGCCGTCAACAGAGCACCGCTGAATTTGAGTGGCTCTAGAAGCGGAACAAGCTCGGCATTCTTTGGAACCGGCTTGAGGAAAATCAGCTTTAGGGTTCCCAACCAGAGGAATTCGTGTGGGAATTTTAAGGTTTCTGCATCAACAGACTATGAAGAGGAGAAACAGACCGAAAAGGACAGATGGGGAGGGCTTGCCACTGATACTTCAGATGACCAACAGGACATCACTAGAGGAAAGGGAATGGTGGACACTCTCTTCCAAGCTCCCATGGAGTCTGGCACCCACTATGCTGTCATGAGTTCCTATGATTACATCAGTGCCGGTCTTCGCCAATTGGACAACACTATGGATGGCTTCTACATTGCCCCTGCATTTATGGACAAGGTTGTTGTTCacatcaccaagaactttcTGACTTTGCCAAACATTAAAGTTCCTCTTATTTTGGGTATTTGGGGAGGCAAAGGTCAGGGGAAATCATTCCAGTGTGAGCTTGTCTTTGCCAAGATGGGAATCAACCCCATTGTGATGAGTGCTGGAGAACTGGAAAGTGGGAATGCCGGAGAGCCGGCGAAGTTGATTAGGCAAAGGTACCGTGAGGCGGCAGACATCATCAGAAAAGGGAAAATGTGCTGTCTCTTCATCAACGACCTTGATGCCGGAGCTGGTAGGCTCGGTGGAACCACACAATACACTGTGAACAACCAGATGGTAAATGCAACCCTCATGAACATTGCTGATAACCCTACCAATGTCCAGCTTCCTGGTATGTACAACAAAGAGGAGAATCCCCGTGTGCCAATCATCGTCACTGGTAACGATTTCTCAACACTTTATGCTCCTCTCATTCGTGATGGACGAATGGAGAAATTCTACTGGGCGCCCACTAGGGAAGACCGTATCGGTGTCTGCCAAGGTATCTTCAGGACAGACAATGTTCCAAAGGAGGACATCATCAAGCTTGTTGACACCTTCCCAGGGCAATCCATAGACTTCTTTGGTGCCGTGAGGGCAAGAGTGTATGATGATGAAGTGAGGAACTGGATTTCTGGTGTGGGAGTAGAGAATGTTGGGAAAAGGCTTGTGAACTCAAAAGAAGGGCCTCCAACTTTTGAGCAGCCAAGGATGAGTCTAGAGAAGCTGCTTGAGTATGGAAACATGCTTGTCAAAGAGCAAGAGAATGTGAAGAGAGTTCAATTAGCTGACAAGTACCTCAAGGAGGCAGCCCTTGGAGATGCCAATGAAGATGCCATGAAGAGTGGAAACTTCTACGTTGAACATTTGATCCTTGAGGCTAAGGTCACTGAAGAGAAAATTGGACAAGCAGCTCAACAGGTTCATATTCCTGTCCCAGAAGGTTGCACAGATCCTGCTGCTGCAAACTTTGATCCAACGGCTAGGAGTGATGATGGAAGCTGCacttacaaattttaa 1461 0.4675 MATSVSTVGAVNRAPLNLSGSRSGTSSAFFGTGLRKISFRVPNQRNSCGNFKVSASTDYEEEKQTEKDRWGGLATDTSDDQQDITRGKGMVDTLFQAPMESGTHYAVMSSYDYISAGLRQLDNTMDGFYIAPAFMDKVVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIVMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCQGIFRTDNVPKEDIIKLVDTFPGQSIDFFGAVRARVYDDEVRNWISGVGVENVGKRLVNSKEGPPTFEQPRMSLEKLLEYGNMLVKEQENVKRVQLADKYLKEAALGDANEDAMKSGNFYVEHLILEAKVTEEKIGQAAQQVHIPVPEGCTDPAAANFDPTARSDDGSCTYKF 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2366 486 Gene3D - 120 304 IPR027417 -
Sto1g2366 486 PANTHER - 1 485 IPR044960 -
Sto1g2366 486 Gene3D - 305 417 - -
Sto1g2366 486 MobiDBLite consensus disorder prediction 56 82 - -
Sto1g2366 486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 126 329 IPR027417 -
Sto1g2366 486 MobiDBLite consensus disorder prediction 56 74 - -
Sto1g2366 486 Pfam ATPase family associated with various cellular activities (AAA) 160 301 IPR003959 GO:0005524|GO:0016887
Sto1g2366 486 PANTHER RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC-LIKE ISOFORM X1 1 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2366 Sto-Chr1 31544167 31547170 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2366 - - gmx:100795298 841.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2366 1 31544167 31547170 Sto5g1616 5 11311222 11314782 ECH
Sto1g2366 1 31544167 31547170 Sto1g2366 1 31544167 31547170 ECH