Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1607 ATGGGATATCTAAAGTTGCAAATTCAAAATGGTTCCAACGCAATAGAAGAGGGACCTGCACAATGTGGTGCAAGATATCTGGACAAGACCACTGTAGCATGCATGATCAATGCAGAAATTAGTGCTGTTTTGGCAGTCATGCGAAGAAATGTTAGATGGGGAATACATTATATGTTAGATGATGATCAGTGGGATCACACTCTTGTTCAGTCTTTGAAGGAATTAAGGAAGAAAATTTTTACATGGCCAAATCAGTGGCATGCTATTGACCCTGCCTTGTATCTCCAGCCTTTTCTGGATGTGATTCAATCAGATGAAACTAGTGCACCAATAACTGGTGTTGCTTTGTCATCTGTTTACAAGATCTTAACGCTCGATGTTATTGATCAGAACACTGTTAAAGTTGGGGATGCCATGCACTTGGTGGTTGATGCTGTTACAAGTTGCAGATTTGAGGTGACTGATCCTGCATCAGAAGAAGTGGTACTAATGAAGATATTACAAGTTCTTTTAGCATGTGTGAAAAACAAAGCTTCTGCAATGTTGAGTAACCAACATGTTTGCACTATAGTAAATACTTGTTTCCTCATAGTTCATCAAGCAGGAACCAAAGGTGAGTTGTTGCAGCGGATAGCACGCTCCACAATGCATGAACTCGTTAGGTGTATTTTCTCTCACCTTCAAGATATTGACAACAAAATGTGTACATTGGTAAATGGAAGCAATTCTTTGAAACAAGAGCATGGTGTGCTAAATAATGAGCATGATTTTGCAAGCAGACAACTGGAGAATGGGACCTCAAGTTCTGCATATGATACTCAATTATTATCTTCAACCATGGGTTCCAATGCTGGTATTGTAGTGGAAGAAAATACAGCTACTGATAGCAGTGGCAAGGATAATGCCCAACATGAATTGCATCTCATGACTAAACCGCTGGGGGTTCCCTGCATGGTGGAAATATTTCATTTCTTGTGCTCTTTGTTGAATGTTGTTGAGCATACAGGAATGGGTCCAAGATCAAACACAATAGCATTTGATGAAGATGTGCCCCTTTTTGCTTTGACTTTGATTAATTCAGCCATAGAGTCAGGAGGGCCTTTCATTCGCCTTCATCCCAAGTTGTTGAACTTAATTCAGGATGAGTTATTCCATAATCTTATGCAATTTGGTTTGTCAATGAGTCCCCTTGTACTTTCTATGGTTTGTAGCATTGTTCTCAACCTGTATCACCATCTACGTACAGAACTCAAAATACAGCTAGAAGCATTCTTTTCTTGTATCATTTTGAGGGTTGCACAGGGTAGAGATGGGGCATCATACCAGCAGCAGGAGGTCGCCATGGAGGCCCTTGTTGACTTCTGCAGGCAAAGTTCGTTCATGGTGGAGATGTATGCTAACTTTGATTGTGATATAACTTGTAACAATGTCTTTGAAGATATTgttaacttgttttcaaaaaatgcATTTCCTTTGAACAGTTCATTGTCTTTCATGCATATTCTTGCTTTGGATGCTCTTATTGCTGTCGTGCAGGGAATGGCTGAAAGGATAGATAATGGATCTGTTAGTTCAGAATATCCTCCAATGAAACCTGAAGAGTATACTCCATTATGGATGGAAAAGTGTGACAATTTTGGTGATCCAAATCAGTGGGTTCCTTTTGTAAGCCGAAGAAAGTATTTCAAGAGAAGATTGATGATTGGAGCCGATCACTTCAACCGTGACCCTAAGAAAGGTCTAGAGTTTCTCCAAGGAACACATCTTTTGCCTGATAAACTTGATCCACAAAGTGTTGCCTGCTTTCTCAGATACACGGCTGGGttggataaaaatatcattGGTGATTATCTCGGAAATCATGATAAATTCTGTGTTGAGGTTCTTTATGAATTCGCTAGAACATTTGATTTCCAAGACATGACTTTAGACACTGCACTGCGTCTATTTTTAGAGACTTTCAGACTGCCTGGAGAATCGCAGAAGATTCAAAGGGTGCTTGAAGCTTTCTCTGAGAGATACTACGAACAGTCACCGCATATCCTAGCGAACAAGGATGCTGCTCTAGTGTTATCATACTCAATAATATTGCTTAATACAGATCAGCACAATGCACAGGTCAAAAATAAAATGACTGTAGATGACTTTATCCGGAATAATAGGCAAATAAATGGTGGTAATGATCTACCCCAAGAATTCTTATCGGAGCTTTACTATTCAATTTGTAAGAATGAGATCAGCACTCTCCCTCAACAAGGTGTGGGTTATCCTGAAATGACTCCTAGTCGGTGGATTTATCTAATGCACAAGTCAAAGAAAACTGCTCCATTCATTGTATCTGACAATAGAGCACACCTAGATCATGATATGTTTACTATATTGTCAGGCCCAACAATTGCTGCCATTTCTTTGGTGTTTGATAATGCTGAAAATGAAGAGATATACCAAACATGTATAGATGGATTCTTAGCTGTTGCAAAGATTTCGGCACATTGTCATCTTGAAAATGTACTGGATGATCTGGTTGTGTCCCTTTGTAAGTTCACTACTATCTTGGATCCATCATCAGCTGAGGAATCGGTCCTGGCCTTTGGAGATGACATGAAAGCGAGAATGGCAACTGAGACGGTTTTCACTATTGCAAATAGGTATGGTGATTATATTCGTACAGGGTGGAGAAACATTCTTGATTGCATCTTAAGATTGCACAAGTTAGGTCTTCTTCCTGCTCATATGGCCAGTGATGCAGCTAATGAATCAGAGCTTTCTGCTGAAACTGGGCATGGTAAATATAATGCCAATTATTTGTCTGCTACTAATCTGTCATCTTTTACTACTCCAAAGAGGTCCTCTGGATTGATGAGCAGGTTTGGTCTGTTCTTATCTCTTGGCACTGAAGAGACAAGATCACAACCAACTGAAGAAGAACTTGCTGCTCATCAGTGCACCGTACAAACGATCAAGAGGTGTCACATTGACAGCATATTCACTGAGATTAAATTTCTCCATGCTGAATCTCTATTGCAGCTTGCAAGAGCATTCATAAATGCTGCAGGGCAGTCTCATAAACAAAACAGGTCTCCTGACGATGAGGATGCTGCAGTTTTTTGCCTGGAGTTATTGGTTGCTATTACTCTGAACAACAGGGATAGAATTGGACTTCTTTGGCAGGATGTTTATGAGCACATACGTAATATAGTTCAGTCAACTGTAATGCCTGGTGCACTTGTAGAGAAGGCTATTTTCGGACTCCTCAGGATTTGCCAGCGCTTACTTCCATACAAGGAGAACATTACTGATGAGCTTTTGAGGTCCCTCCAAGTTATCTTGAAGCTTGATGCCCAGGTTGCTGATGCCTATTACGAGCAGATTACGAGGGAAGTCAGTCACCTCGTGAAGGCAAATGCTTCTCGTATAAGATCTTATTCAGGATGGCGAACAATTACGTCCCTACTTTCTATCACATCTAGACACAGGGAAGCATCTGAGGCTGGATTTGATGCACTATTATTCATTATGTCCAATGGAGCCCACTTGCTACCTGCTAATTTTGTTCTCTGTGTGGACACTGCAAGGCAGTTTGCTGAATCTTGGGTTGGACTCGCCAAGCGATCCATAGAGGCATTAGATCTCATGGCAGGGTCTGTGAATTGCTTAGTGCAGTGGACTAGTGAGGCTAAGGAAGCATTAGAGGAGAAGGAGGGGGAAATATCAAAGTTATTACAGGACATTGGAGAGATGTGGTTTAGGCTAGTGCAGGGACTACGTAAAGTATGTTTAGACCAGAGAGAGGAGGTTAGAAATCGTGCTTTATTGTCTTTGCAGAAGTGCTTGACAGAATCTGATGGTATTCATCTTCCACTTGTAGTGTGGTTACAGTGTTTTGATTTGGTGATGTTCCCTGTGCTTGATGACCTGCTAGAAATTGCAAAAGGACACTCTCAAAAGTACTACCACCAGAACATGGAAGACTCACTTATCCTTGCCTTGAATCTCTTGTCTAAAGTTTTCCTACGACTATTACAAGACCTATCACAATCAACAACCTTCTGTAAACTTTGGCTGGGTGTATTAGATCGAATggtaaaatgtatgaaagtgaAAATTAAGGGAAGGACGAGTAGTGAGAAGCTTCAGGAACTAGTGCTTGAGCTTCTTAAGAACAACTTGTTTGTGATGAAATCAATGGGCATACTAGTGAAGAGCAGTTCCTCAGAAGGAGATAGATTGTGGGAACTGACATGGCTACAGGAAGTGTGGGACCCAGTGGAAAGGTTTCTGTTCCTTGGAATGAAACTGCACGCCAAGAAGGATTCTTTGGGAGGTTCTGTGGATTCTGAAACTGATTATGCTGAAGAAGTCATTAAGTTGGCCTCATTCACATCTATACTGTGGCTGGAGCAGGTTGGTCTTACTAAATCTCATATTGGCCTGTCTGTCATTTGCATGAGAATCGTTTTTGCTTGGGTCATTTACAGCAAAATTTCCTCTGTTTCCTTGGAGAACGGTCATCCGAAGTGCAATTTCTGTAAAGTGTTGAAGTGTGTTTATTTATACATTCTAGCTGATTAA 4572 0.404 MGYLKLQIQNGSNAIEEGPAQCGARYLDKTTVACMINAEISAVLAVMRRNVRWGIHYMLDDDQWDHTLVQSLKELRKKIFTWPNQWHAIDPALYLQPFLDVIQSDETSAPITGVALSSVYKILTLDVIDQNTVKVGDAMHLVVDAVTSCRFEVTDPASEEVVLMKILQVLLACVKNKASAMLSNQHVCTIVNTCFLIVHQAGTKGELLQRIARSTMHELVRCIFSHLQDIDNKMCTLVNGSNSLKQEHGVLNNEHDFASRQLENGTSSSAYDTQLLSSTMGSNAGIVVEENTATDSSGKDNAQHELHLMTKPLGVPCMVEIFHFLCSLLNVVEHTGMGPRSNTIAFDEDVPLFALTLINSAIESGGPFIRLHPKLLNLIQDELFHNLMQFGLSMSPLVLSMVCSIVLNLYHHLRTELKIQLEAFFSCIILRVAQGRDGASYQQQEVAMEALVDFCRQSSFMVEMYANFDCDITCNNVFEDIVNLFSKNAFPLNSSLSFMHILALDALIAVVQGMAERIDNGSVSSEYPPMKPEEYTPLWMEKCDNFGDPNQWVPFVSRRKYFKRRLMIGADHFNRDPKKGLEFLQGTHLLPDKLDPQSVACFLRYTAGLDKNIIGDYLGNHDKFCVEVLYEFARTFDFQDMTLDTALRLFLETFRLPGESQKIQRVLEAFSERYYEQSPHILANKDAALVLSYSIILLNTDQHNAQVKNKMTVDDFIRNNRQINGGNDLPQEFLSELYYSICKNEISTLPQQGVGYPEMTPSRWIYLMHKSKKTAPFIVSDNRAHLDHDMFTILSGPTIAAISLVFDNAENEEIYQTCIDGFLAVAKISAHCHLENVLDDLVVSLCKFTTILDPSSAEESVLAFGDDMKARMATETVFTIANRYGDYIRTGWRNILDCILRLHKLGLLPAHMASDAANESELSAETGHGKYNANYLSATNLSSFTTPKRSSGLMSRFGLFLSLGTEETRSQPTEEELAAHQCTVQTIKRCHIDSIFTEIKFLHAESLLQLARAFINAAGQSHKQNRSPDDEDAAVFCLELLVAITLNNRDRIGLLWQDVYEHIRNIVQSTVMPGALVEKAIFGLLRICQRLLPYKENITDELLRSLQVILKLDAQVADAYYEQITREVSHLVKANASRIRSYSGWRTITSLLSITSRHREASEAGFDALLFIMSNGAHLLPANFVLCVDTARQFAESWVGLAKRSIEALDLMAGSVNCLVQWTSEAKEALEEKEGEISKLLQDIGEMWFRLVQGLRKVCLDQREEVRNRALLSLQKCLTESDGIHLPLVVWLQCFDLVMFPVLDDLLEIAKGHSQKYYHQNMEDSLILALNLLSKVFLRLLQDLSQSTTFCKLWLGVLDRMVKCMKVKIKGRTSSEKLQELVLELLKNNLFVMKSMGILVKSSSSEGDRLWELTWLQEVWDPVERFLFLGMKLHAKKDSLGGSVDSETDYAEEVIKLASFTSILWLEQVGLTKSHIGLSVICMRIVFAWVIYSKISSVSLENGHPKCNFCKVLKCVYLYILAD 1523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1607 1523 SUPERFAMILY Sec7 domain 560 748 IPR035999 GO:0005085|GO:0032012
Sto5g1607 1523 SUPERFAMILY ARM repeat 810 1388 IPR016024 -
Sto5g1607 1523 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 316 477 IPR032691 -
Sto5g1607 1523 SMART sec7_5 559 746 IPR000904 GO:0005085|GO:0032012
Sto5g1607 1523 Gene3D - 639 754 IPR023394 -
Sto5g1607 1523 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 16 1417 - -
Sto5g1607 1523 SUPERFAMILY ARM repeat 69 1363 IPR016024 -
Sto5g1607 1523 Pfam Sec7 domain 563 746 IPR000904 GO:0005085|GO:0032012
Sto5g1607 1523 Gene3D - 556 638 - -
Sto5g1607 1523 ProSiteProfiles SEC7 domain profile. 555 744 IPR000904 GO:0005085|GO:0032012
Sto5g1607 1523 CDD Sec7 563 746 IPR000904 GO:0005085|GO:0032012
Sto5g1607 1523 Coils Coil 1223 1243 - -
Sto5g1607 1523 PANTHER PATTERN FORMATION PROTEIN GNOM PROTEIN 16 1417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1607 Sto-Chr5 11266168 11271896 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1607 K18443 - gmx:100780239 2183.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1607 5 11266168 11271896 Sto5g1606 5 11258718 11263683 CCT