Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1606 ATGGGACGCTTAAAGTTGCAAGCTGGTATCAATGCAATAGAGGAGGAACCTGAGGAGTTTGATGCTGCATGCCCTAGCAAAACTACTTTATCATGCATGATCAATTCTGAAATTGGTGCCGTTCTGGCAGTCATGCGAAGAAATGTAAGATGGGGAGGTCGTTATATGTCAGGTGATGATCAGCTGGAGCACTCTCTTATTCAATCCTTGAAGACCTTAAGGAGGCAAATATTTTCATGGCAGCATCAGTGGCATGCTATCAACCCTGTCTTATATCTCCAGCCTTTTCTGGATGTTATTCGATCAGGAGAAACAGGTGAACCAAGTACCATTGTTGCTTTGTCATCTGTTTACAAGATCTTAACTCTGGATGTGATCGATCAAAATACTATCAATGTTGAGGATGCCATGCACCTGGTGGTTGATGCTGTCACTAGCTGCAGATTTGAGGTGACTGATCCTGCATCTGAAGAAGTAGTTTTAATGAAGATACTACAAGTTCTTCTGGCTTGTATGAAAAGTAAAGCATCTATAATGCTGAGTAATCAACATGTTTGCACCTTAGTGAATACTTGTTTTCGAATAGTTCATCAAGCAGGATCCAAAGGTGAGTTGTTGCAGCAGATAGCACGCTACACAATGCATGAACTTGTCAGGTGTATTTTCTCACATCTTCAAGATGTTGCCAACACAGAGCATGCATTAGTAAATGGAAACTCTACTTTAAAACAGGAGAATCTATTTCTTGTGCAGATTGGAGGGTTAAACAATGAGTATGCTTTTGGAAATAAACAATTGGAGAATGGGAGCATGAATTCTGAATATGATAATCACTCGTTACCAACTGCTACCAATAATGTGACTGTTGTGACAGCAAATGCAATGGATGATAACACAGCTATTGCTAGTATTGGCAAGGAGACTGTACCATATGACATGCATCTCATGACTGCCCCATATGGAGTTCCCTGCATGGTGGAAATATTTCATTTCTTGTGTTCTTTGCTGAATGTTGTTGAGCATATGGACATGGGTGCTAGATCAAATACAGTAGCGTTTGATGAAGACGTGCCCCTTTTTgccttaaatttaattaatgctGCCATAGAATTGGGAGGGCCTTCCATTCGTCGACACCCCAGGTTGCTGAGCTTAGTTCAGGATGAATTGTTCCGTAATCTGATGCAGTTTGGTTTGTCGACGAGTCCCCTTATACTTTCAATGGTGTGTAGCATCGCTCTCAACCTGTATCATCATCTTTGTACAGAACTCAAATTGCAGCTTGAAGCATTTTTCTCTTGTGTCATTTTGAGGCTTGCACAAAGCAGATATGGGGCTTCATACCAGCAGCAGGAGGTTGCTATGGAGGCCCTTGTTGACTTTTGCAGGCAAAAAACATTTATGGTAGATATGTACGCTAACTTTGACTGTGACATTACTTGCAGTAATGTCTTTGAAGACCTTGCCAATTTGTTGTCAAAAAGTGCATTTCCTGTAAACTGTCCATTATCTTCCATGCATATTCTTGCTTTGGATGGTCTCATTGCTGTTATACAGGGAATGGCTGAAAGGATTGGCAATGGATCTGTTAGTTCAGGACGTTCTCCAGTTAATCTTGAGGAGTATACACCATTCTGGATGGTTAAGTGTGAGAATTACAGTGATCCAAATCAATGGGTCCCTTTTGTCCGCAGAAGGAAGTACATCAAGAGAAGATTGATGATTGGAGCTGACCACTTTAACCGTGATCCTAAGAAAGGTCTAGAGTTTCTGCAGGGAACACATCTTTTGCCTGACAAACTTGATCCCCAAAGTGTTGCTTGCTTTTTCAGGTACACTGCTGGGTTGGATAAGAATCTTGTTGGTGATTTCTTAGGAAATCATGATGAATTCTGTGTTCAGGTTCTTCATAAATTTGCTGGAACATTTGATTTTCAAGATATGAATCTAGACACTGCTCTCCGACTATTTTTGGAGACTTTCAGATTACCAGGAGAATCTCAAAAGATACAAAGGGTGCTTGAAGCTTTTTCTGAGAGATACTACGAGCAGTCACCACATATCCTAGCTAACAAGGATGCTGCACTCTTGTTATCATATTCACTCATAATGCTTAATACAGATCAGCACAATGTACAGGTAAAGAAGAAGATGACAGAAGAGGATTTTATCCGAAATAATAGGCATATAAATGGTGGCAATGATCTACCTCGAGAGTTCCTGACAGAGCTTTACCATTCAATTTGTAAGAATGAGATCCGTACTACCCCTGAACAAGGTGCTGGATTTCCTGAAATGACACCAAGTCGGTGGATTGATCTAATGCACAAGTCAAAGAAAACTGCTCCATTCATTGTATCTGATTCCAGAGCCTACCTTGATCATGACATGTTTGCTATAATGTCAGGTCCAACAATTGCTGCCATATCTGTGGTATTTGATCATGCTGAACATGAAGAGGTATACCAAACCTGTATGGATGGATTCTTAGCTGTTGCAAAGATTTCAGCTTGTCATCATCTGGAAGATGTTCTGGATGATCTAGTTGTGTCACTTTGCAAGTTCACTACTCTTTTGAACCCATCATCAGTGGAGGAACCAGTCCTAGCCTTTGGAGATGACACAAAAGCAAGAATGGCAACTGTAACAGTTTTCACTATTGCAAATAGGTATGGTGATTACATCCGCACAGGATGGAGAAATATACTTGATTGCATCTTAAGATTACACAAGCTAGGACTTCTTCCTGCCCGTGTAGCCAGTGATGCAGCTGATGAGTCAGAGCTATCTGCTGAAACTGGCCCTGGGAAGCCTATAACAAATTCTTTATCATCAGCTCATATGCCATCTATTGGTACTCCAAGGAGATCCTCAGGATTGATGGGCAGGTTTAGTCAGCTCTTATCTCTTGAAACTGAGGAGCCAAGATCACAGCCTACTGAACAACAACTAGCTGCTCATCAACGAACCCTACAAACAATACAGAAATGTCACATTGACAGCATATTCACTGAAAGCAAATTTTTGCAGGCTGAATCTCTATTGCAACTTGCAAGAGCACTCATTTGGGCTGCAGGGTTTCCTCAGAAAGGGAACAGCACACCTGAGGATGAAGATACTGCTGTGTTCTGCTTGGAGTTGCTGATTGCAATCACTTTGAATAACAGGGATAGAATTGGAATACTTTGGCAGGGTGTGTATGAGCACATTTCTAATATTGTTCAGTCAATTGTAATGCCTTGTGCTCTGGTAGAAAAGGCTGTTTTTGGACTCCTAAAGATTTGCCAACGGTTGCTTCCCTACAAAGAGAGCATTGCTGATGAACTTTTGAGGTCCCTACAACTTGTCCTAAAGCTTGATGCCCGGGTTGCTGACGCATACTGTGAGCAGATTACACAGGAAGTCAGTCGCCTTGTGAAGGCAAATTCTTCCCATATTAGATCGCAGTTAGGATGGCGCACAATTACATCACTACTTTCCTTCACAGCTAGACACCTAGAAGCGTCTGAGCCTGGGTTTGATGCACTGTTGTTCATAATGTCTGATGGATCCCACTTGCTACCAGCTAATTATGTTCTCTGCGTAGATGCTGCAAGGCAGTTTGCTGAATCTCGTATTGGACAGGCAGAGCGGTCTGTACGGGCACTAGATCTCATGGCAGGGTCTGTCAATTGCTTAGTTCAGTGGACTAGTGAAGCTAAGGAAGCAATGGAGGAGGAAGAACTCTCTAAGTTGTCTCAGGACATTGGAGAGATGTGGTTGAGGCTAGTGCAGGGACTAAGGAAAGTATGTTTAGACCATCGAGAGGAGGTTAGAAATCATGCTTTATTATCACTGCAGAGGTGCTTGACAGGAGCTGATGGGATTTATCTCCCGCTTAGTGTGTGGTTACAGTGTTTTGATCTGGTCATCTTCACTGTGCTTGATGACCTGCTTGAAATTGCACAAGGACAGTCTCAAAAGGACTACCGCAACATGGAAGGCACACTTATCTTTGCTGTGAAGCTCTTGTCTAAAGTATATCTTCAGTTACTCCAAGACCTATCCCAATTAACAACGTTCTGCAAACTATGGTTGGGTGTACTGAGCCGAATGGAAAAATATATGAAGGTGAAAGTTAGAGGAAAAAGAAGCGAGAAGCTTCAAGAGCTAGTGCCTGAGCTTCTTAAAAACATCTTACTTGTTATGAAGACAAGAGGCATACTGGTGCAGAGGAGTGCCTTAGGCGGCGATAGTTTATGGGAATTGACATGGCTACATGTGAACAACATTGCTCCATCATTGCAATCTGAGGTGTTTCCCGAGCAGGATTCCATCCGTTTGCAACACAAACAGGGTGAACCAATCGGAGGTTTGGAACCTGATGAAATGCGTTCTGTTACTACAAATGACACGGCGAGCCGGGAAGATTCAGGTGTCGTTGGTTAA 4428 0.4212 MGRLKLQAGINAIEEEPEEFDAACPSKTTLSCMINSEIGAVLAVMRRNVRWGGRYMSGDDQLEHSLIQSLKTLRRQIFSWQHQWHAINPVLYLQPFLDVIRSGETGEPSTIVALSSVYKILTLDVIDQNTINVEDAMHLVVDAVTSCRFEVTDPASEEVVLMKILQVLLACMKSKASIMLSNQHVCTLVNTCFRIVHQAGSKGELLQQIARYTMHELVRCIFSHLQDVANTEHALVNGNSTLKQENLFLVQIGGLNNEYAFGNKQLENGSMNSEYDNHSLPTATNNVTVVTANAMDDNTAIASIGKETVPYDMHLMTAPYGVPCMVEIFHFLCSLLNVVEHMDMGARSNTVAFDEDVPLFALNLINAAIELGGPSIRRHPRLLSLVQDELFRNLMQFGLSTSPLILSMVCSIALNLYHHLCTELKLQLEAFFSCVILRLAQSRYGASYQQQEVAMEALVDFCRQKTFMVDMYANFDCDITCSNVFEDLANLLSKSAFPVNCPLSSMHILALDGLIAVIQGMAERIGNGSVSSGRSPVNLEEYTPFWMVKCENYSDPNQWVPFVRRRKYIKRRLMIGADHFNRDPKKGLEFLQGTHLLPDKLDPQSVACFFRYTAGLDKNLVGDFLGNHDEFCVQVLHKFAGTFDFQDMNLDTALRLFLETFRLPGESQKIQRVLEAFSERYYEQSPHILANKDAALLLSYSLIMLNTDQHNVQVKKKMTEEDFIRNNRHINGGNDLPREFLTELYHSICKNEIRTTPEQGAGFPEMTPSRWIDLMHKSKKTAPFIVSDSRAYLDHDMFAIMSGPTIAAISVVFDHAEHEEVYQTCMDGFLAVAKISACHHLEDVLDDLVVSLCKFTTLLNPSSVEEPVLAFGDDTKARMATVTVFTIANRYGDYIRTGWRNILDCILRLHKLGLLPARVASDAADESELSAETGPGKPITNSLSSAHMPSIGTPRRSSGLMGRFSQLLSLETEEPRSQPTEQQLAAHQRTLQTIQKCHIDSIFTESKFLQAESLLQLARALIWAAGFPQKGNSTPEDEDTAVFCLELLIAITLNNRDRIGILWQGVYEHISNIVQSIVMPCALVEKAVFGLLKICQRLLPYKESIADELLRSLQLVLKLDARVADAYCEQITQEVSRLVKANSSHIRSQLGWRTITSLLSFTARHLEASEPGFDALLFIMSDGSHLLPANYVLCVDAARQFAESRIGQAERSVRALDLMAGSVNCLVQWTSEAKEAMEEEELSKLSQDIGEMWLRLVQGLRKVCLDHREEVRNHALLSLQRCLTGADGIYLPLSVWLQCFDLVIFTVLDDLLEIAQGQSQKDYRNMEGTLIFAVKLLSKVYLQLLQDLSQLTTFCKLWLGVLSRMEKYMKVKVRGKRSEKLQELVPELLKNILLVMKTRGILVQRSALGGDSLWELTWLHVNNIAPSLQSEVFPEQDSIRLQHKQGEPIGGLEPDEMRSVTTNDTASREDSGVVG 1475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1606 1475 Pfam Sec7 domain 570 753 IPR000904 GO:0005085|GO:0032012
Sto5g1606 1475 SUPERFAMILY ARM repeat 154 1367 IPR016024 -
Sto5g1606 1475 ProSiteProfiles SEC7 domain profile. 562 751 IPR000904 GO:0005085|GO:0032012
Sto5g1606 1475 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 10 1443 - -
Sto5g1606 1475 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 323 484 IPR032691 -
Sto5g1606 1475 MobiDBLite consensus disorder prediction 926 959 - -
Sto5g1606 1475 MobiDBLite consensus disorder prediction 1444 1475 - -
Sto5g1606 1475 PANTHER ARF GUANINE-NUCLEOTIDE EXCHANGE FACTOR GNOM-LIKE 10 1443 - -
Sto5g1606 1475 MobiDBLite consensus disorder prediction 934 952 - -
Sto5g1606 1475 SUPERFAMILY Sec7 domain 567 758 IPR035999 GO:0005085|GO:0032012
Sto5g1606 1475 Gene3D - 646 763 IPR023394 -
Sto5g1606 1475 CDD Sec7 570 753 IPR000904 GO:0005085|GO:0032012
Sto5g1606 1475 SMART sec7_5 566 753 IPR000904 GO:0005085|GO:0032012
Sto5g1606 1475 Gene3D - 563 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1606 Sto-Chr5 11258718 11263683 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1606 K18443 - gmx:100780239 2617.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1607 5 11266168 11271896 Sto5g1606 5 11258718 11263683 CCT