LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto5g1510	ATGGGAACCTACAGCTACAAAGTCTTCAAATGCTTCAACCGTAAGTTTACTATCACCGAGCCGGGCCCACCCGATGACGTCAAGTACGCCTTCTACAAGTTCTCCTCCGGCGCCGATCACATGTCCGCCGATCAGTTCCGGCGGTTCCTGGTGGAGAACCAAGGCGAATCGGATTGTACCTCTTCGGATTCCGCCGTGATAGTTGACAAGATTTTGCAAgaCTCTGATGGTGGCGGTCTCAGTCTCGACGAATTCTTTCATTTTCTACTCCTCGATGATTTCAATGCTCCCTTTAAATCTCAGGTGCATCAAGATATGAATGCTCCGCTGTCACATTATTTCATATATACAGGACACAATTCTTATTTGACTGGGAATCAACTGAGCAGTGATTGTAGTGATGTGCCGATTATAAAGGCTTTGCAAGATGGTGTGCGAGTAATTGAACTAGATATATGGCCCAATTCAACTAAAGATGATGTGGTTGTAGTTCATGGAGGGACTTTGACCACTCCTGTTTCACTCGTTCAATGTTTGAAGTCCATAAAAGAGTATGCTTTTGTTAGTTCTCATTACCCAGTCATTATAACTTTAGAAGATCACCTCACAACAGATCTTCAAGCTAAAGTTGCAGAGATGGCAACACAAATATTTGGAGAAACGCTTTATTATCCTGAGACAGATAGTATGGAAGAATTCCCCTCACCAGAATCATTGAAAGATCGAATTTTTATATCAACCAAACCACCAAAAGAATATCTCGAAAGTGAAGCAGAAGCTGATGACAAgAGTGAAAATGATGAAGTGGAAGATATGAATTCAAGTGAAACAAAATCACTTCAGCAATGTGCACCTGAATACGGACGCTTAATTACAATCCATGCTGGGAAACCAAAGGGTCATGCAAATGATTATTTAAGCGTCAGTGGTGATGTTAGACGCCTAAGCTTGAGCGAACATATGCTTGAAAATACTTCTGAAGGACATGGAACCAAAATTGTTAGGTTCACACAGAAGAATATTCTCAGGGTGTATCCAAAAGGAACACGCGTGTCCTCTTCAAATTACATGCCACATATTGCGTGGGTATATGGAGCTCAGATGGTTGCATTCAACATGCAGGGGTATGGCAAACCACTATGGTGCATGCAAGGGATGTTTAGAGGAAATGGAGGGTGTGGCTATGTGAAAAAGCCCGAATGTCTACTGGAGAGAGGTCCAAACGATGAGGTTTTTGATCCTAGCATAACGTTGCCAGTGAAGAAGACATTAAAGGTTAAGGTGTATATGGGGACTGGATGGAGCTCAGATTTCAGCCAAACACACTTTGATTCGTTCTCCCCACCAGACTTTTACACTAAGGTCAGCTAG	1371	0.4252	MGTYSYKVFKCFNRKFTITEPGPPDDVKYAFYKFSSGADHMSADQFRRFLVENQGESDCTSSDSAVIVDKILQDSDGGGLSLDEFFHFLLLDDFNAPFKSQVHQDMNAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALQDGVRVIELDIWPNSTKDDVVVVHGGTLTTPVSLVQCLKSIKEYAFVSSHYPVIITLEDHLTTDLQAKVAEMATQIFGETLYYPETDSMEEFPSPESLKDRIFISTKPPKEYLESEAEADDKSENDEVEDMNSSETKSLQQCAPEYGRLITIHAGKPKGHANDYLSVSGDVRRLSLSEHMLENTSEGHGTKIVRFTQKNILRVYPKGTRVSSSNYMPHIAWVYGAQMVAFNMQGYGKPLWCMQGMFRGNGGCGYVKKPECLLERGPNDEVFDPSITLPVKKTLKVKVYMGTGWSSDFSQTHFDSFSPPDFYTKVS	456

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto5g1510	456	PANTHER	PHOSPHOINOSITIDE PHOSPHOLIPASE C 6	1	455	-	-
	Sto5g1510	456	SUPERFAMILY	PLC-like phosphodiesterases	104	404	IPR017946	GO:0006629\|GO:0008081
	Sto5g1510	456	Pfam	Phosphatidylinositol-specific phospholipase C, X domain	106	248	IPR000909	-
	Sto5g1510	456	PRINTS	Phospholipase C signature	109	127	IPR001192	GO:0035556
	Sto5g1510	456	PRINTS	Phospholipase C signature	135	155	IPR001192	GO:0035556
	Sto5g1510	456	PRINTS	Phospholipase C signature	232	249	IPR001192	GO:0035556
	Sto5g1510	456	PRINTS	Phospholipase C signature	341	362	IPR001192	GO:0035556
	Sto5g1510	456	PRINTS	Phospholipase C signature	362	380	IPR001192	GO:0035556
	Sto5g1510	456	ProSiteProfiles	Phosphatidylinositol-specific phospholipase X-box domain profile.	104	248	-	-
	Sto5g1510	456	SMART	plcy_3	287	403	IPR001711	GO:0004435\|GO:0006629\|GO:0007165\|GO:0035556
	Sto5g1510	456	MobiDBLite	consensus disorder prediction	251	279	-	-
	Sto5g1510	456	Gene3D	-	23	100	-	-
	Sto5g1510	456	ProSiteProfiles	Phosphatidylinositol-specific phospholipase Y-box domain profile.	316	402	IPR001711	GO:0004435\|GO:0006629\|GO:0007165\|GO:0035556
	Sto5g1510	456	SUPERFAMILY	EF-hand	5	106	IPR011992	-
	Sto5g1510	456	CDD	PI-PLCc_plant	103	390	-	-
	Sto5g1510	456	Pfam	Phosphatidylinositol-specific phospholipase C, Y domain	315	401	IPR001711	GO:0004435\|GO:0006629\|GO:0007165\|GO:0035556
	Sto5g1510	456	Gene3D	Phosphatidylinositol (PI) phosphodiesterase	101	416	IPR017946	GO:0006629\|GO:0008081
	Sto5g1510	456	PANTHER	PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN	1	455	IPR001192	GO:0035556
	Sto5g1510	456	SMART	plcx_3	104	248	IPR000909	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto5g1510	Sto-Chr5	10468534	10472344	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto5g1510	2	455	Acyl Lipid Metabolism Gene Families	AT2G40116	56.634	0.0	556

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto5g1510	K05857		-	gmx:100799027	659.448

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto5g1510	5	10468534	10472344	Sto5g1510	5	10468534	10472344	CCT
	Sto9g2539	9	27996746	28001688	Sto5g1510	5	10468534	10472344	ECH
	Sto5g1510	5	10468534	10472344	Sto5g1510	5	10468534	10472344	ECH