Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1472 ATGGAGGCTCTCAAGAGCATTCATAACCACTCATTCATTTTCTTAGCCATTCTGGTTCTTTTTGCTACTTCTGCATTAATGTCTTCAGCAAATGCCAATAAAGTTCACGAGCACCAGTTTGTGGTTCAAGCGAGTCCAGTGAAGAGGCTGTGCAAAACCCACAACACCATCACAGTGAATGGCCAATTCCCTGGCCCAACTTTGGAGATCAACAATGGAGACACTTTGGTCGTCAAAGTCATTAACAAAGCTCGTTACAACGTCACCATTCACTGGCATGGGGTTAGGCAAATGAGAACTGGGTGGGCCGATGGGCCTGAGTTTGTGACGCAGTGTCCTATTCGTCCTGGAGAGAGCTATACCTACCGATTTACTATTGAAGGACAAGAAGGCACTCTTTGGTGGCATGCTCATAGCTCATGGCTTAGAGCCACTGTTTATGGTGCTTTAATCATTCGTCCTAGACAAGGAGAGCCCTATCCTTTTCCTAAGCCCAAGCGTGAGACTCCTATTCTTCTAGGGGAATGGTGGGACACAAATCCCATTGATGTCTTGAGGGAGGCCACTCGTACAGGAGCTGCTCCTAACGTATCTGATGCTTATACCATCAATGGTCAACCTGGTGATCTTTACAAGTGCTCTTCCAAAGGCACCACCGTCGTCCCAATAGACTCCGGCGAGACCAATCTCCTCCGAGTCATCAATGCTGCACTCAATCAGCCCCTCTTCTTCACCGTCGCCAACCACAAACTCACGGTGGTCGGCGCCGACGCCTCCTACCTGAAGCCCTTCACCACCACCGTCCTCATGCTGGGACCCGGCCAAACCACCGACGTCCTCATCACCGCCGACCAACCACCCTCCCAATACTACATGGCGGCGCGTGCATACCAATCGGCCCAAAACGCGCCCTTCGACAACACCACAACCACCGCCATTCTCCAATACAAATCCGCCACGTGTTCGAAAAGCCCATGCTCCAAGTCCCACCACACTAAGCCCATAATGCCCCCACTCCCAGCCTACAACGACACCAACACCGTAACGTCCTTCAGCGCGAAATTCCGAAGCCCAAGAAAAGCTGAAGTGCCCACGGAGATCGACGAGAGCCTGTTCGTCACGGTGGGCCTTGGGCTCAACAAATGCCCGCCAAACTTCCGCAAAAGGCGGTGCCAGGGGCCCAATGGGACCCGATTCACCGCGAGCATGAACAACGTCTCCTTCGCCCTCCCCAACAACATCTCCATCCTTCAGGCCCATCAGCAGGGGATCCCGGGGGTTTTCACCAGCGACTTCCCGGCGAGACCGCCGGTGAAGTTCGATTACACCGGAAACGTGAGCCGATCACTGTGGCAACCAAATCGGGGGACGAAGGTGTACAAACTGAAATACGGATCTAGGGTTCAGGTGGTTTTGCAGGACACTAACATCGTGACGTCGGAGAACCACCCGATCCATCTTCACGGGTACGATTTCTACATCGTGGCGCAAGGATTTGGGAATTTTAACCCTAAGAAGGATTCTTCCAAGTTCAACCTTATTGATCCTCCTATGAGGAATACTGTGGCTGTACCTGTGAATGGATGGGCTGTGATTCGATTTGTCGCTGATAATCCTgGTGCGTGGATTATGCATTGCCATTTGGATGTTCATATCAATTGGGGATTGGCGATGGTGTTCGTGGTAGAGAATGGAGTAGGAAAATTGCAATCCATAGAGCCTCCTCCCGCAGATCTGCCTCTGAACCATCCCATCACAGAATTCCGTGGATGCCAACATATCCCCCAACATTCCCAACACCTCCATATTCTCCATGAAATTCGACATCTCCTTATCGTCCACATTCGCCATTTTGTGTCTCCTCCCCACCATCGCCAGATCATAATCCCTCTCCAATCCTCGTATTGCCTCCAACACTCCCACCGCATCCTCCACCACTATCTCCTCGCACACCACATTCTCGTTCCCAATATTCTTCGTCTTAAACTCGTCCATAAAACTCTCGTCCAGAATCTTCTCCACCTCATCATCaccatcctcctcctcctcctccacgtCATCTTCGAAAATACTACCCACCTTATTCTCCTCATCCTCCGCgctattcttcttcttattactCATTTGGAACCAAAACAACGACACCTTCGTGCTCTGGCGATCCTCCGTCATCCGTATGCCCAACGACAAGGCCTCCCGGTCGTCGGGCCCACCCATGAAGAAAATGCCGACGTGGAAGCGGGCCCCAGATTTGATCACGCACACGTCGGGGTGTCTGTCCACGAGGATTCCCACGGTGCAGGGCGCGTAATGCTGGAAGTTGGTGGTGCACGTGCTCACGTAATTCCTCCCGTGCTCGTTGAAGGGAACGATCATGAAAGGTATAGATTTCTCCCCAGCGAGATTACATATAGCCTCGTGCATTTGCTTGTAAGGAGCCACGTTGAGATAAGGCCGAACCACGACGCGACCGTCGGAGTTGTGAGCGTAGTTCTCGAAGGCTCGCATGATGTGGTGGGTGTTTGGGTAGTTCTTGGACAAGGATTTCCTCCTGTGCTTGTTGGAATCCATGGGGAGTAG 2580 0.5105 MEALKSIHNHSFIFLAILVLFATSALMSSANANKVHEHQFVVQASPVKRLCKTHNTITVNGQFPGPTLEINNGDTLVVKVINKARYNVTIHWHGVRQMRTGWADGPEFVTQCPIRPGESYTYRFTIEGQEGTLWWHAHSSWLRATVYGALIIRPRQGEPYPFPKPKRETPILLGEWWDTNPIDVLREATRTGAAPNVSDAYTINGQPGDLYKCSSKGTTVVPIDSGETNLLRVINAALNQPLFFTVANHKLTVVGADASYLKPFTTTVLMLGPGQTTDVLITADQPPSQYYMAARAYQSAQNAPFDNTTTTAILQYKSATCSKSPCSKSHHTKPIMPPLPAYNDTNTVTSFSAKFRSPRKAEVPTEIDESLFVTVGLGLNKCPPNFRKRRCQGPNGTRFTASMNNVSFALPNNISILQAHQQGIPGVFTSDFPARPPVKFDYTGNVSRSLWQPNRGTKVYKLKYGSRVQVVLQDTNIVTSENHPIHLHGYDFYIVAQGFGNFNPKKDSSKFNLIDPPMRNTVAVPVNGWAVIRFVADNPGAWIMHCHLDVHINWGLAMVFVVENGVGKLQSIEPPPADLPLNHPITEFRGCQHIPQHSQHLHILHEIRHLLIVHIRHFVSPPHHRQIIIPLQSSYCLQHSHRILHHYLLAHHILVPNILRLKLVHKTLVQNLLHLIITILLLLLHVIFENTTHLILLILRAILLLITHLEPKQRHLRALAILRHPYAQRQGLPVVGPTHEENADVEAGPRFDHAHVGVSVHEDSHGAGRVMLEVGGARAHVIPPVLVEGNDHERYRFLPSEITYSLVHLLVRSHVEIRPNHDATVGVVSVVLEGSHDVVGVWVVLGQGFPPVLVGIHGE 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1472 859 Gene3D - 20 154 IPR008972 -
Sto5g1472 859 SUPERFAMILY Cupredoxins 33 181 IPR008972 -
Sto5g1472 859 Pfam Multicopper oxidase 432 564 IPR011706 GO:0005507|GO:0016491
Sto5g1472 859 Gene3D - 387 587 IPR008972 -
Sto5g1472 859 TIGRFAM laccase: laccase 34 580 IPR017761 GO:0046274|GO:0048046|GO:0052716
Sto5g1472 859 ProSitePatterns Multicopper oxidases signature 2. 545 556 IPR002355 GO:0005507
Sto5g1472 859 Gene3D - 166 360 IPR008972 -
Sto5g1472 859 CDD CuRO_3_LCC_plant 427 565 IPR034289 GO:0005507
Sto5g1472 859 CDD CuRO_1_LCC_plant 38 154 IPR034288 GO:0005507
Sto5g1472 859 PANTHER LACCASE 8 580 - -
Sto5g1472 859 ProSitePatterns Multicopper oxidases signature 1. 540 560 IPR033138 -
Sto5g1472 859 SUPERFAMILY Cupredoxins 364 582 IPR008972 -
Sto5g1472 859 CDD CuRO_2_LCC_plant 170 316 IPR034285 -
Sto5g1472 859 SUPERFAMILY Cupredoxins 162 358 IPR008972 -
Sto5g1472 859 Pfam Multicopper oxidase 42 156 IPR011707 GO:0005507
Sto5g1472 859 Pfam Multicopper oxidase 168 318 IPR001117 -
Sto5g1472 859 PANTHER MULTI-COPPER OXIDASE 8 580 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1472 Sto-Chr5 10106759 10110935 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1472 K05909 - gmx:547704 1020.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1472 5 10106759 10110935 Sto5g1472 5 10106759 10110935 CCT
Sto9g2583 9 28327987 28330441 Sto5g1472 5 10106759 10110935 ECH
Sto5g1472 5 10106759 10110935 Sto5g1472 5 10106759 10110935 ECH