Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2785 aTGTCctcttccaccaccaccaccaccaaagGCAAAGATCACACACAACAAGGAGGATCTTCTTCTTCACCTtccaatcatcatcatcaaaaccaccatcttcctcctcctcatgATCATCAGCCTCCTCTGAGCCGCTACGAGTCCCAGAAGCGCCGGGATTGGAACACCTTCGGGCAATACCTCCGCAACCAACGGCCTCCGGTGGCTTTGTCCCACTGCAATTTCAACCATGTCCTCGAATTCCTCCGGTACCTCGACCAATTCGGGAAGACCAAGGTTCATCTCCAACCCTGTCTCTTTTTTGGCCAACCCGACCCGCCTGCTCCTTGCACCTGCCCTCTCAGGCAAGCCTGGGGAAGCCTCGATGCCCTCATCGGCCGCCTTCGCGCTGCCTATGAGGAGAACGGCGGCCTCCCCGAGTCCAACCCCTTTGCCAGCGCGGCAATCCGGGTTTACCTCCGGGACGATGCCTCCGGTAATAATAACTTACCTTTGCAGtga 504 0.496 MSSSTTTTTKGKDHTQQGGSSSSPSNHHHQNHHLPPPHDHQPPLSRYESQKRRDWNTFGQYLRNQRPPVALSHCNFNHVLEFLRYLDQFGKTKVHLQPCLFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGLPESNPFASAAIRVYLRDDASGNNNLPLQ 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2785 167 MobiDBLite consensus disorder prediction 1 48 - -
Sto4g2785 167 MobiDBLite consensus disorder prediction 1 30 - -
Sto4g2785 167 ProSiteProfiles ALOG domain profile. 46 167 IPR006936 -
Sto4g2785 167 Pfam ALOG domain 40 156 IPR006936 -
Sto4g2785 167 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 9 156 - -
Sto4g2785 167 PANTHER PROTEIN G1-LIKE2 9 156 IPR040222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2785 Sto-Chr4 28730609 28731247 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2785 - - pop:18095487 233.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0176 7 1311506 1312322 Sto4g2785 4 28730609 28731247 ECH
Sto4g2785 4 28730609 28731247 Sto13g2101 13 28043892 28049601 ECH
Sto4g2785 4 28730609 28731247 Sto4g2785 4 28730609 28731247 ECH