Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2101 TTGAGCCGGTACGAGTCACAGAAGCGGCGAGACTGGAACACGTTCGGACAATACCTGAAGAACCAGACACCCGCCGCCGTCCCTCTCTCTCACTGCACCTTCAACCACGTGCTCGACTTCCTCCGATACCTCGACCAGTTCGGGAAGACTAAGGTCCACTTGCCAGGCTGTGTCTTCTTCGGGCAGCCTGACCCTCCTGCCCCTTGCACCTGCCCTCTCCGCCAGGCCTGGGGCAGCCTCGACGCCCTCATCGGCCGCCTCCGAGCCGCCTTCGAGGAACACGGCGGCTCACCCGACCAGAACCCCTTCGCCACCGCGCCCATCCGGCTCTACCTCCGTGAAGAGTATACGAAGGAATTAGTAGCTGGATTAAGCAGAAATGATACAGAGAAAGAACATTTGCTGAAAGTATCATCTCTGCAGTTTCAACCACAATCTCCTCACAAAAGAAATAGTAATATTGTCATTAAGTTTTAG 477 0.5556 LSRYESQKRRDWNTFGQYLKNQTPAAVPLSHCTFNHVLDFLRYLDQFGKTKVHLPGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAFEEHGGSPDQNPFATAPIRLYLREEYTKELVAGLSRNDTEKEHLLKVSSLQFQPQSPHKRNSNIVIKF 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2101 158 ProSiteProfiles ALOG domain profile. 3 131 IPR006936 -
Sto13g2101 158 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 2 115 - -
Sto13g2101 158 PANTHER PROTEIN G1-LIKE2 2 115 IPR040222 -
Sto13g2101 158 Pfam ALOG domain 2 114 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2101 Sto-Chr13 28043892 28049601 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2101 - - fve:101295692 214.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2101 13 28043892 28049601 Sto13g2101 13 28043892 28049601 ECH
Sto7g0176 7 1311506 1312322 Sto13g2101 13 28043892 28049601 ECH
Sto4g2785 4 28730609 28731247 Sto13g2101 13 28043892 28049601 ECH