Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0306 ATGAGAGGAAAAATGGGTACTTCTCCACATGCCATTGAAGCAAGACATCGTTTACCTACATCAATTGAAGACTTGTACAAAAGAAGATTGGCAAGAAGTAAAATCAAAGATGAACTAGAGAAACCATTCCACTTGCACATCCAAGACAAGAGCTCAACAAGATGCAAATTCTCTTTCTTGAAACTCATCCTATTAATAACCATTTGTGGCACTCTTGTAACACTCATGTACTCTCCAGAGGTTTATAATAGCAACCACTTATCAACCTCTGGCTCTCGGTGGATATGGGGTGGTTCAGATCCTcgatatatatcaaatttaaacaTTGAGTGGGATAATGTATTGAAAATTACCGAGAAGCTGATCAAGGAAGATGAATTTCAAGGGATTGGCCTTCTGAATTTCAATAAGACTGAAATAGACCGCTGGGAGGAGCTTATTCCTGATGCCACACAAGTTGTGCTGCACCTTGACTATGCTGCAGAAAACGTGACATGGGAGTCTCTTTACCCAGAATGGATTGATGAGGAAGAAGAGATTGAAGTTCCTGTGTGTCCTTCTCTACCGACTCTCCGATCTCCCGGAATAAGGCTTAATCTCATAGCTGTGAAGCTTCCTTGTAGGAATGGAAGAGAGAATTGGTCTAGAGATGTTGCTAGGTTGCACCTGCAGCTTGCAGCAGCTGGTCTTGCAGCCTCTTTCAAAGGGAATTACCCTGTTCATGTGCTCTTCATTACCAATTGCTTTCCAATACCAAATTTATTTACCTGCAAAGAACTTGTTGAACGTGAAGGGAATGCTTGGTTGTATAGACCGAACCTGAGTGTTCTCAAACAGAAAGTTCAGCTACCAGTAGGATCCTGTGAACTCGCACTTCCTATGAGGGGAAAAGAGCTGGTTTACACTGGAAATGTTCACAGAGAAGCTTACGCAACAATCCTTCACTCAGCTCATGTTTACGTGTGTGGAGCCATTGCTGCTGCACAAAGCATCCGCATGTCCGGTTCAGTTCGAGACCTCGTCATCCTCGTCGACGAAACAATCAGTGGCTATCACAGAAGCGGTCTGGAAGCAGCAGGGTGGAAAGTAAGAACAATCCAGagaatccgaaaccctaaagccgaGAAAGACGCATACAATGAATGGAACTACAGCAAGTTCCGACTATGGCAGCTCACAGATTACGACAAGATCATATTCATCGATGCAGATTTGCTCATACTTCGGAACCTAGATTTCCTATTCGGAATGCCAGAGATCACAGCCACCGGCAATAACGCCACACTTTTCAACTCCGGCGTCATGGTAATCGAGCCTTCCAATTGCACATTCCACCTCCTAATGGATCACATCAACGAGATCGAGTCCTACAACGGCGGAGATCAAGGATATTTAAACGAAATATTCACATGGTGGCATAGGATTCCAAGACACATGAATTTCTTGAAGCATTTCTGGATCGGAGACGAGGAAGAGAAGAAGCAGATGAAAACCAACCTATTTGGAGCGGAGCCTCCGATTCTGTACGTGCTTCACTATTTAGGATTGAAGCCATGGCTGTGCTTTAGGGACTACGACTGTAACTGGAACGCCGATATATTCCACGAGTTTGCTTCCGATGTAGCTCATGCGAGGTGGTGGAAGGTGCACGATGCGATGCCCGAGGTTTTGCAGGGGTTTTGCTTGTTGAAATCGAAGCAGAAGGCACAGCTGGAGTGGGATCGGAGGCAGGCGGAGACGGCGAATTATACGGATGGGCATTGGAGAATTAGGGTTAGAGATGGGAGGCTGAAGAAATGTGTGGATAATTTGTGCTCCTGGAAAAGCATGTTGAGGCATTGGGGAGAGACGAATTGGACGGACGATGAGATTTATACACCAACACCACCTGCTATTACTACCACTGCGTCTCTTTCTGGTTTGTGA 1926 0.4434 MRGKMGTSPHAIEARHRLPTSIEDLYKRRLARSKIKDELEKPFHLHIQDKSSTRCKFSFLKLILLITICGTLVTLMYSPEVYNSNHLSTSGSRWIWGGSDPRYISNLNIEWDNVLKITEKLIKEDEFQGIGLLNFNKTEIDRWEELIPDATQVVLHLDYAAENVTWESLYPEWIDEEEEIEVPVCPSLPTLRSPGIRLNLIAVKLPCRNGRENWSRDVARLHLQLAAAGLAASFKGNYPVHVLFITNCFPIPNLFTCKELVEREGNAWLYRPNLSVLKQKVQLPVGSCELALPMRGKELVYTGNVHREAYATILHSAHVYVCGAIAAAQSIRMSGSVRDLVILVDETISGYHRSGLEAAGWKVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNLDFLFGMPEITATGNNATLFNSGVMVIEPSNCTFHLLMDHINEIESYNGGDQGYLNEIFTWWHRIPRHMNFLKHFWIGDEEEKKQMKTNLFGAEPPILYVLHYLGLKPWLCFRDYDCNWNADIFHEFASDVAHARWWKVHDAMPEVLQGFCLLKSKQKAQLEWDRRQAETANYTDGHWRIRVRDGRLKKCVDNLCSWKSMLRHWGETNWTDDEIYTPTPPAITTTASLSGL 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0306 641 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 1 20 618 - -
Sto4g0306 641 SUPERFAMILY Nucleotide-diphospho-sugar transferases 308 553 IPR029044 -
Sto4g0306 641 Pfam Glycosyl transferase family 8 314 417 IPR002495 GO:0016757
Sto4g0306 641 PANTHER GLYCOGENIN SUBFAMILY MEMBER 20 618 - -
Sto4g0306 641 CDD GT8_Glycogenin 308 553 - -
Sto4g0306 641 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 305 555 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0306 Sto-Chr4 2370150 2374314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0306 13 640 Glycosyltransferase AT3G18660 66.512 0.0 873
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0306 K20890 - gmx:100809361 1145.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0306 4 2370150 2374314 Sto4g0306 4 2370150 2374314 ECH
Sto3g3178 3 36637029 36642174 Sto4g0306 4 2370150 2374314 ECH