Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1640 ATGTCCCACTCGGCGGTTACTCCCACCCCTATTCTCAAGGATGAGCTCGACATCGTGATTCCCACGATCCGGAACCTCGACTTCTTGGAGATGTGGAGGCCCTTCTTCCAACCCTACCACCTCATAATTGTGCAAGACGGTGATCCATCGAAGACGATTAACGTCCCCGAAGGCTTCGATTACGAGCTCTACAACCGCAACGACATCAATCGGATTCTCGGCCCTAAGGCCTCTTGCATTTCCTTCAAGGACTCTGCTTGTCGCTGCTTTGGATATATGGTGTCCAAGAAGAAGTATATCTACACTATTGACGACGATTGCTTTGTTGCTAAAAATCCATCTGGTGAAGACATCAATGCCCTGCAGCAGCACATCAAGAACCTTCTGAGTCCATCAACCCCATATTTTTTCAACACTCTCTATGATCCATACAGAGACGGTGCAGATTTTGTCCGCGGATACCCATTTAGTCTACGCGAAGGAATCCCAACAGCTGTTTCTCATGGCCTCTGGCTCAACATTCCTGATTATGATGCTCCAACTCAGCTTGTCAAGCCTCTGGAAAGAAACACTAGCATTTCTCCTATGCTCTTTCTTAGGTATGTAGATGCTGTTATGACAATACCGAAAGGAACCCTCTTTCCCATGTGTGGTATGAATTTGGCTTTTAACCGTGAATTAATCGGTCCTGCAATGTACTTTGGACTCATGGGTGATGGTCAACCTATCGGGCGCTACGATGACATGTGGGCTGGCTGGTGCATCAAGGTGATATGTGATCATTTGGGATTAGGGGTGAAGACAGGCTTGCCCTACATTTGGCACAGCAAAGCTAGCAACCCATTTGTGAACCTTAAGAAGGAGTACAAGGGAATTTACTGGCAGGAGGAGCTGATTCCATTTTTCCAATCTGTTTCTCTTCCAAAAGATTGCACAAGTGTTCAGAAATGTTACCTTGAACTGTCGAAGCAAGTTAAGGCAAAACTCGGTAAGGTCGATGAGTACTTCAACAAGCTTGCAGATGCTATGGTGACCTGGATTGAAGCATGGGATGAACTAAACCCAGGAAACTAG 1074 0.4637 MSHSAVTPTPILKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKTINVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKNPSGEDINALQQHIKNLLSPSTPYFFNTLYDPYRDGADFVRGYPFSLREGIPTAVSHGLWLNIPDYDAPTQLVKPLERNTSISPMLFLRYVDAVMTIPKGTLFPMCGMNLAFNRELIGPAMYFGLMGDGQPIGRYDDMWAGWCIKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEELIPFFQSVSLPKDCTSVQKCYLELSKQVKAKLGKVDEYFNKLADAMVTWIEAWDELNPGN 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1640 357 PANTHER UDP-ARABINOSE MUTASE 3 355 IPR037595 -
Sto3g1640 357 PANTHER UDP-ARABINOPYRANOSE MUTASE 3 3 355 - -
Sto3g1640 357 Pfam Reversibly glycosylated polypeptide 12 354 IPR037595 -
Sto3g1640 357 SUPERFAMILY Nucleotide-diphospho-sugar transferases 16 231 IPR029044 -
Sto3g1640 357 PIRSF UPTG 6 357 IPR004901 GO:0016866|GO:0071669
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1640 Sto-Chr3 12376236 12378402 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1640 K13379 - cpap:110813344 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1640 3 12376236 12378402 Sto12g0987 12 6141235 6143047 ECH
Sto3g1640 3 12376236 12378402 Sto3g1640 3 12376236 12378402 ECH