Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0987 ATGTGGAGGCCATTCTTTCAGCCTTACCACCTCATAATTGTGCAGGATGGTGACCCttccaagaccatcaaggtcccCGAAGGCTTCGATTACGAGCTCTACAACCGCAACGACATCAATCGCATCTTGGGTCCTAAGGCCTCTTGTATCTCCTTTAAGGACTCCGCTTGCCGCTGCTTCGGTTACATGGTCTCCAAGAAGAAGTACATCTACACTATTGACGACGATTGCTTTGTTGCTAAAGATCCATCTGGCAAAGACATCAATGCCCTTGAGCAGCACATTAAGAACCTTCTGTGTCCATCAACCCCATTTTTCTTCAACACTCTCTATGACCCATACAGAGATGGTGCGGATTTCGTACGTGGCTATCCATTTAGCCTACGTGAAGGTGTACCAACAGCTGTTTCTCATGGCCTCTGGCTCAACATTCCTGACTATGATGCCCCAACTCAGCTTGTCAAGCCACTAGAAAGGAACACTAGGTATGTAGATGCAGTTATGTCCATCCCAAAGGGAACTCTGTTTCCAATGTGTGGTATGAACTTGGCATTCAACCGTGATTTGATTGGTCCAGCAATGTACTTTGGACTCATGGGCGATGGTCAACCCATTGGACGCTACGACGATATGTGGGCTGGCTGGTGCACCAAGGTCATATGCGACCATTTGGGATTGGGGGTGAAGACAGGTTTGCCCTACATCTATCACAGCAAAGCTAGCAACCCCTTTGTGAACCTGAAGAAAGAGTACAAAGGAATTTACTGGCAGGAAGAGTTGATTCCATTTTTCCAATCTGTTTCCTTACCAAAGGAATGCACTACCGTTCAGAAGTGTTACATCGAGCTCTCCAAGCAGGTCAAGGCTAAACTTGGAAAAGTTGATGAATACTTCAACAAGCTTGCAGATGCTATGGTCACATGGATTGAAGCTTGGGATGAACTAAACCCATCTGGGGAAAAATCTGTTGCAGCATTGCCCAATGGTCCCGCTAAGTGA 999 0.4565 MWRPFFQPYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLCPSTPFFFNTLYDPYRDGADFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPLERNTRYVDAVMSIPKGTLFPMCGMNLAFNRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCTKVICDHLGLGVKTGLPYIYHSKASNPFVNLKKEYKGIYWQEELIPFFQSVSLPKECTTVQKCYIELSKQVKAKLGKVDEYFNKLADAMVTWIEAWDELNPSGEKSVAALPNGPAK 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0987 332 Pfam Reversibly glycosylated polypeptide 1 316 IPR037595 -
Sto12g0987 332 PANTHER ALPHA-1,4-GLUCAN-PROTEIN SYNTHASE [UDP-FORMING]-LIKE PROTEIN 1 321 - -
Sto12g0987 332 PANTHER UDP-ARABINOSE MUTASE 1 321 IPR037595 -
Sto12g0987 332 SUPERFAMILY Nucleotide-diphospho-sugar transferases 7 212 IPR029044 -
Sto12g0987 332 PIRSF UPTG 1 320 IPR004901 GO:0016866|GO:0071669
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0987 Sto-Chr12 6141235 6143047 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0987 K13379 - rcu:8265060 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1640 3 12376236 12378402 Sto12g0987 12 6141235 6143047 ECH
Sto12g0987 12 6141235 6143047 Sto12g0987 12 6141235 6143047 ECH