Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1614 ATGGCCGCCGCTCTACTTCTCGCCGCAGCGATTCTCTCAGCCTTCACCGCTTCTTCAAGCGGTGGTGGAGGAAATTGGTGCGTGTGCAAAGACGGAAGCGATTCGGTGTTGCAGAAGACGCTGGATTACGCGTGTGGAGCGGGAGCAGATTGCAACCCTATCCGTCAGAATGGGCCGTGTTTTCAGCCCAATACGGTTAGGGCCCACTGCAACTATGCCGTCAACAGCTATTTCCAGCGTAAAGGCCAAACGCAAGAGGCATGTCAGTTTGCCGGAACCGCCACCGTTACCGCCTCCGATCCCAGTTCTTCTGGATGTTCCTATCCTTCAAGCGCCAGCAATGGAGGCACTAGCACCACCTCTCCTACGACAACAACACCATCCACAAACAACCCGTCGACTTCGACCGGCACGGGGACATCCTCGTCCTCATCGTCGTCGTCGACCGCCACTCCGTACAGCAGCGCTACGACTCCCGGAGTATTAGGAGGAATTGGCAATAGTGGCATAGGGCCTTCAGGAGCAGGAATGAACACAGATGAAAGTCATGGTGGGCTTAGGGTTGTAGACACCAGtttcttgtcttcttcttcttcttccttttcaaTGCTTCTCTTCTCATCAGGCTTCATCATGCTTTGGTGGGGTTGA 651 0.5269 MAAALLLAAAILSAFTASSSGGGGNWCVCKDGSDSVLQKTLDYACGAGADCNPIRQNGPCFQPNTVRAHCNYAVNSYFQRKGQTQEACQFAGTATVTASDPSSSGCSYPSSASNGGTSTTSPTTTTPSTNNPSTSTGTGTSSSSSSSSTATPYSSATTPGVLGGIGNSGIGPSGAGMNTDESHGGLRVVDTSFLSSSSSSFSMLLFSSGFIMLWWG 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1614 216 Gene3D - 24 122 - -
Sto3g1614 216 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 3 1 200 - -
Sto3g1614 216 SMART X8_cls 25 108 IPR012946 -
Sto3g1614 216 PANTHER BETA-1,3 GLUCANASE 1 200 IPR044788 -
Sto3g1614 216 MobiDBLite consensus disorder prediction 97 162 - -
Sto3g1614 216 MobiDBLite consensus disorder prediction 97 182 - -
Sto3g1614 216 Pfam X8 domain 26 95 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1614 Sto-Chr3 12071025 12077253 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1614 26 130 Glycoside Hydrolase AT1G66250 42.056 1.93e-22 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1614 - - gmx:100812033 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1614 3 12071025 12077253 Sto12g0960 12 5964875 5968322 ECH
Sto3g1614 3 12071025 12077253 Sto3g1614 3 12071025 12077253 ECH