Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0960 ATGGCTCCTTTAACTCTTGTTGTGCTTCTCTTGGCCTTCACTGGCTCTTCAAGTGCCAATTGGTGCGTTTGCAAGGATGGAAGCGACGCAATCCTTCAGAAGACCTTAGACTATGCTTGTGGAGCTGGGGCTGACTGTACGAACATCCATCAAAACGGACCATGTTTCAACCCAAACACCGTTAGGGCTCACTGTAACTACGCCGTTAACAGCTATTTCCAAAGGAAGGGTCAAGCCCAAGGGTCCTGTGACTTCGCAGGAACGGCCACCGTTACTGCATCTGACCCCAGTAGTGCCGGTTGTGCTTACCCTTCAAGCCCTAGaattcaaatatacatcTATTTTGTGAAATCACCGACTATATTGAATCTGCGATTTTCCTTCACCAGCACTGCAGGCACTAGTACAACCACCCCGGGGACAACTACACCAACCACGGCCACCCCTTACACCGGAACTCCGACGGCCACCGGCTCCACGACACCgtcctcctccaccaccaccacggcCACTCCTTACAGTGCGACACCGGGAGTATTAGGGGGGATTAACAGTGGCATGGGACCTACCGGTGGCATGAGCACTGATGATGGAAGCCATGGTGGGCTTAGACTTTTGGACCATAGTTTCCTCTCTCCATTCTCAATCCTCCTCTTTTCAGCCTCTATTATCATGATGATGCTTTAG 687 0.4847 MAPLTLVVLLLAFTGSSSANWCVCKDGSDAILQKTLDYACGAGADCTNIHQNGPCFNPNTVRAHCNYAVNSYFQRKGQAQGSCDFAGTATVTASDPSSAGCAYPSSPRIQIYIYFVKSPTILNLRFSFTSTAGTSTTTPGTTTPTTATPYTGTPTATGSTTPSSSTTTTATPYSATPGVLGGINSGMGPTGGMSTDDGSHGGLRLLDHSFLSPFSILLFSASIIMMML 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0960 228 Gene3D - 16 108 - -
Sto12g0960 228 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 3-LIKE ISOFORM X1 158 222 - -
Sto12g0960 228 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 3-LIKE ISOFORM X1 2 159 - -
Sto12g0960 228 MobiDBLite consensus disorder prediction 133 175 - -
Sto12g0960 228 Pfam X8 domain 21 90 IPR012946 -
Sto12g0960 228 PANTHER BETA-1,3 GLUCANASE 158 222 IPR044788 -
Sto12g0960 228 PANTHER BETA-1,3 GLUCANASE 2 159 IPR044788 -
Sto12g0960 228 SMART X8_cls 20 103 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0960 Sto-Chr12 5964875 5968322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0960 17 104 Glycoside Hydrolase AT4G34480 48.315 1.63e-22 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0960 - - gmx:100812033 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1614 3 12071025 12077253 Sto12g0960 12 5964875 5968322 ECH
Sto12g0960 12 5964875 5968322 Sto12g0960 12 5964875 5968322 ECH