Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1526 TTGCAACATGTGCAAAAACAGTCGTCAGCAGTTTCGAAGCCTTCTAGCCGCAATCCCAAACGAAAAATGTTGGAGGGTTCATCCAGTCTCGTTTCAAGGGAGTTGCTTAACTCATGTAACGAAGAAAAGCTATTGGCCTACGACACTCAAAGCGGGAGGGACCTATCAGGCAATAAGCACCCacgggaagaagaaggggaaggggaAGAAGTGGTGAGAAAGTTATGCAAACTTGCTGATGATACTAAGGAAGAGGAGAAACAGATCGTGAAGGTCTCTGAAGACATTTCCCTTCCTAAGAACAAGATAAGGAATGTTGATGATCCATCCGAtatcaattttcttttcactaacattGACAGGGACATGTCACTACAATGTCTTATGCGGTGCACCAGGGCTGATCATCCCATAATTGCCTCATTGAATAGCGGTTTTCGGTCTCTCATTCGCAGTGGAGAATTGTATAAGGTCAGGAGGGAGGCCGGAATTGTGGAGTATTGGGTTTACATCTCCTGTGGCCTCAGTGAATGGGAGGCATACGATCCAAATGAAGGCCGTTGGGTGACATTGCCAATATTGCCTGCAAATCAATGCTTTCTGTGTTCAGGCAAGGAGTCACAGGCTGTAGGTACTGATCTTCTTATTTTTGGAAAGGATATCATGGCTTCTGTCATTTACAAATACAGCATTTTGACCAATTCTTGGTCACATGGCACAAGCATGAACTTTCCCAGATGCTTGTTCGCTTCTGGGAGTCTTGGAGAAATTGCAATAGTAGCTGGAGGTTGTGATGCAGTTGGCAATATTACAAACGCAGTTGAGCTTTACAACTCGGGAACTCAAACTTGGGAAATGCTTCCAAGCATGAAATTTGCAAGGAAGATGTGTGCTGGTGCGTTTATGGATGGCAAATTCTATGTTATTGGCGGCATTAGTAAAGTCAACACGCCGCAACTAACAAGTGGTGAGGAGTTCGATCTGAAGACAAGAACATGGCGCTGTATACCTGACATGTTCCCTCGAAATGGTAGATCTGTGGTGAATAGTGTTTCTGAGGCACCACCTCTTATTGCTGTTGTGGGTAATCAATTGTATGCTGCTGATTATGCAGAGGAGGTGGTAAGGAGATATGTCAAAGAACTTAACTCTTGGGTCTCAATTGGAGGACTTCCTAGGCGTGTGACTTCGATGAAAGGTTGGGGATTAGCCTTTCGAGCTTGTGGAGATCAGCTGATTGTTATCGGTGGCCCTAAGGTTCCTGAGGGAAGGTTTATTGAGGTTTATGGTTGTGTCCCAGGTGATGACGCACTGGAGTGGAACTTGCTTGCCCGTAGGCACTCGGGGCACTTTGTGTATAACTGTGCAGTGATGGGATGCTGA 1383 0.4411 LQHVQKQSSAVSKPSSRNPKRKMLEGSSSLVSRELLNSCNEEKLLAYDTQSGRDLSGNKHPREEEGEGEEVVRKLCKLADDTKEEEKQIVKVSEDISLPKNKIRNVDDPSDINFLFTNIDRDMSLQCLMRCTRADHPIIASLNSGFRSLIRSGELYKVRREAGIVEYWVYISCGLSEWEAYDPNEGRWVTLPILPANQCFLCSGKESQAVGTDLLIFGKDIMASVIYKYSILTNSWSHGTSMNFPRCLFASGSLGEIAIVAGGCDAVGNITNAVELYNSGTQTWEMLPSMKFARKMCAGAFMDGKFYVIGGISKVNTPQLTSGEEFDLKTRTWRCIPDMFPRNGRSVVNSVSEAPPLIAVVGNQLYAADYAEEVVRRYVKELNSWVSIGGLPRRVTSMKGWGLAFRACGDQLIVIGGPKVPEGRFIEVYGCVPGDDALEWNLLARRHSGHFVYNCAVMGC 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1526 460 SMART kelc_smart 305 355 IPR006652 GO:0005515
Sto3g1526 460 SMART kelc_smart 257 304 IPR006652 GO:0005515
Sto3g1526 460 SMART kelc_smart 215 256 IPR006652 GO:0005515
Sto3g1526 460 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 23 460 - -
Sto3g1526 460 Gene3D - 156 449 IPR015915 GO:0005515
Sto3g1526 460 MobiDBLite consensus disorder prediction 55 69 - -
Sto3g1526 460 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 23 460 - -
Sto3g1526 460 Pfam Kelch motif 245 290 IPR006652 GO:0005515
Sto3g1526 460 Pfam Kelch motif 293 339 IPR006652 GO:0005515
Sto3g1526 460 SUPERFAMILY Kelch motif 174 456 IPR015915 GO:0005515
Sto3g1526 460 MobiDBLite consensus disorder prediction 47 69 - -
Sto3g1526 460 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1526 Sto-Chr3 11286502 11288278 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1526 107 333 Miscellaneous Gene Families AT4G33900 27.234 8.60e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1526 - - gmx:100813260 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1526 3 11286502 11288278 Sto12g0881 12 5522810 5524135 ECH
Sto3g1526 3 11286502 11288278 Sto3g1526 3 11286502 11288278 ECH