Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1419 ATGTTCAAACAGGACGGCATTGCAAGTGGGTTTGGGTCTTCATCTCCTGATAATTCAATTGAGCAAGAGTCATCATCCTCGTCATCAGGAGGGGATCGGTCGAACTCAAATCATATGAATGTCAAGAACTCTGTCTGGGAGACCGATGATTCTACGGTTTCCGATTGCGAAAGTGGTGTCTCGGGAGGTAACTATGCGCAACGACGTCGTACTAGTTTGTTCGACGAAGGATCATTCGTGAGGCTCCCAGAAGGAGACAGGGTTCACGACCTTATTCATAGAAGATTCATTCTGGGTTTGGGTTTGCTTGGGGCGCAAACGAAGGTCGTCGCCATTCATAGAAATGCTTGTACTAGCGCTATGGCGCAAGCACGAGTTCAATCGTTTCAGGTTTACATGCGAGCGACGGAGAAGAGCCGCAATGGAAATGCCAATGTGAAGTATGCTTGGTACGGAACTTCTGGTAGGGAAGAGATAGGAGATATTGCTTCACACGGTTTTGGTCATTGTGGTGGGAAATCTCAGAATAATGATGGACTTTATGGTTGTGGAGTTTATCTCTCACCAGATGATTCTCCTCTCGATAGTGTGAAAAGCTGTGTTGTGGACAAGGACGGTCTGAGGCACTTGGTACTGTGTCGTGTTATTTTGGGGAGAACAGAGGTTGTTCATCCTGGTTCTGAGCAATGTCATCCCAGTTCTGAAGATTATGATTCAGGGGTGGTGGATGATCTTTCATCTCCTAAGAAGTATGTTGTTTGGTGTACTCGAATGAACACCCATATCTTTCCGGAATATGTTATAAGTTTCAGACTTCCCTCTTTTGAAGGACTTGGGAGGATTGAACAACCGTTGAGAAGACCATCTTCCCCTTGGATGCCATTTCCAACTCTCATTTCTGTGCTTTCCAAGTTCTTGTCTCCGCCTGCTATTGCCTTGATATCAAAGTACCATAAAGATCACAGAGACAATAAGATTTCAAGACATGAACTGATACAAAAAGTGAGACAAGTAGCTGGAGACAAGTTGCTGATTGCAGTCATCAAATCATTCAGAgccaagAAAACGAAACAGAGCATACTCTTCGATTCAATGATGGAAGCCTTGCCTATGGCGTCTGATCAATTATCAGCTTCTCCAAGTTTCAATAGCTATTCCTCAGAAACGCTGGCCGAGATAGCCGCCAGAGTCTTGGAGGAACTCCGTATCGGTGCTACTCATCCTCTCTCCCTTCCCGACCACCACGAGGACGATGCACTACTTTTTGACTCCTGGGAATCTGACCTAAACGACGCCGTTCAGGACAGCGCCGACGACGATTTCGAGTTCGCTCTGGTTTGTAGAGACCAGAATTCTTCGCCGGTGTCCGCCGATGATATTTTCTACAATGGCCAGATCAAGCCTATCTATCCGATCTTCGATCACAGTTTGGTATTCGCGGCGACGCAAAACGACGTCGTGTCGCGCGAATCTACGACGACGCCGGTTCGTCGCCATCGTCGACTTCCTCTGAGGAAGCTCATGTTCGAGGAGCGAGAAACAGAGTCGTGTTCGTCTTCCGCCTCCGATGCCGACGACATCAAGATCGGCGCCGCCGCGCCGGAGAACTATTGCGTGTGGAGTCCCAAATCGGCGGCGCCGGCGGGAAGAAGAAGTGAGCGCAAGAAGAGCAAATCGACGGAGTCTTCGTCGTCGTCGAAGCGGTGGAATCTGAAGGATCTATTGTTTCTTCGAAGCGGTAGTGAGAGTAAGAATGATGCGGTGGTGTTTCTGAGTCAGAGCAAGAGGAGCAGTAAAGTGGCTCAGGAGGTTCCGAAGCACGACGGCGGAAGGGAATTTCAGTACCACGTGAGAAAAGGTCCGGCGGCGAAGAAAGGGGTTgaaacgaagaagaagaagtcggTGTTGCCTCACAAGCAAGAATTGATTGGGATATTTAATAATGTGAATGGAGTTGGAAGGAATTTACACCCATTCTAG 1980 0.4747 MFKQDGIASGFGSSSPDNSIEQESSSSSSGGDRSNSNHMNVKNSVWETDDSTVSDCESGVSGGNYAQRRRTSLFDEGSFVRLPEGDRVHDLIHRRFILGLGLLGAQTKVVAIHRNACTSAMAQARVQSFQVYMRATEKSRNGNANVKYAWYGTSGREEIGDIASHGFGHCGGKSQNNDGLYGCGVYLSPDDSPLDSVKSCVVDKDGLRHLVLCRVILGRTEVVHPGSEQCHPSSEDYDSGVVDDLSSPKKYVVWCTRMNTHIFPEYVISFRLPSFEGLGRIEQPLRRPSSPWMPFPTLISVLSKFLSPPAIALISKYHKDHRDNKISRHELIQKVRQVAGDKLLIAVIKSFRAKKTKQSILFDSMMEALPMASDQLSASPSFNSYSSETLAEIAARVLEELRIGATHPLSLPDHHEDDALLFDSWESDLNDAVQDSADDDFEFALVCRDQNSSPVSADDIFYNGQIKPIYPIFDHSLVFAATQNDVVSRESTTTPVRRHRRLPLRKLMFEERETESCSSSASDADDIKIGAAAPENYCVWSPKSAAPAGRRSERKKSKSTESSSSSKRWNLKDLLFLRSGSESKNDAVVFLSQSKRSSKVAQEVPKHDGGREFQYHVRKGPAAKKGVETKKKKSVLPHKQELIGIFNNVNGVGRNLHPF 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1419 659 MobiDBLite consensus disorder prediction 1 40 - -
Sto3g1419 659 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 45 361 IPR044964 -
Sto3g1419 659 MobiDBLite consensus disorder prediction 542 564 - -
Sto3g1419 659 MobiDBLite consensus disorder prediction 8 40 - -
Sto3g1419 659 Pfam RCD1-SRO-TAF4 (RST) plant domain 287 352 IPR022003 -
Sto3g1419 659 MobiDBLite consensus disorder prediction 548 562 - -
Sto3g1419 659 ProSiteProfiles RST domain profile. 286 357 IPR022003 -
Sto3g1419 659 Gene3D - 78 271 - -
Sto3g1419 659 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4 45 361 - -
Sto3g1419 659 SUPERFAMILY ADP-ribosylation 123 271 - -
Sto3g1419 659 Pfam Protein of unknown function (DUF1645) 457 630 IPR012442 -
Sto3g1419 659 ProSiteProfiles PARP catalytic domain profile. 65 290 IPR012317 GO:0003950
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1419 Sto-Chr3 10363225 10372981 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1419 - - csin:114284002 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1419 3 10363225 10372981 Sto12g0792 12 5005856 5007505 CCT
Sto3g1419 3 10363225 10372981 Sto3g1419 3 10363225 10372981 ECH