Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0792 ATGGTGCTAGAAAACGACCAAAACGGGTATAATACTACTCCGTGGTTGAAAGCTGATGAGATAGGGACTTCAGCTTCAAACGAATTTTATCAATCGGATCATGTGAAGGTTGAGAATTCGATCTGTGGGGAGACCACGAGCAACGAAGAAACAGCAGTTTCCGATTGCGAAAGTGGTGTTTCTGGAAGCTACTGTGTGCAACAACACCATCTGTTCGATGAAGGTTTTGTTAGACTCGCAGAAGGTGACAGGGTTCATGACCTCGTTCGAACAAGATTCATTCGGTCTTTGGGTATGCTTGGGGAGCGGACGGAGGTCGTCGCAATTCACAGAAATGCTTGTTCTAGCGTTATGGCACAAGCTCGGATTCAATCATTTCAGGTTTATATGCGAGCTGAGGAAAAGAGGCGTCATGGTAATGCCAATGTGAAATATGCTTGGTATGGGACTTCTGGTAAGGAAGAGATAGGAGTGATCATTTCACACGGTTTTGGTCATGGTGGTAAATCTCAGAATAATAATGGACTCTTTGGTTCCGCACTGTATCTCTCTCCAGATGATTCTCCTCTGGAAAGTGTGAAAAGCTCTACGGTTGATGAAGATGGTATTCGGCACTTATTACTGTGTCGCGTTATACTGGGGAAGCCAGAGCTTGTGCATCCTGGTTCTGACCAACGATATCCGAGTTCTGAAGAATATGATTCCGGGGTGGACAGTCTTTCCGCTCCCAAGAAGTACATTATCTGGTGTGCCCGGATGAACACTCATATATTGCCGGAATATGTAATAAGTTTCAAAGTTCCTTCCATGAAAGGGCTTGTGAAGTTTGAAGAAACTTTTAGAAAACCATCTTCGCCTTGGATGCCATTTCCCACTCTAATTTCTGTGCTTTCTAAGTTTCTGCCTCCACCTACTATTGCcttgatctccaagtttcacaaAGATCACAGAGAAAAGAAGATTTCACGAGAGGAACTGGTACAAAAAGTGAGACAAATAGCAGGAGACAAGTTGTTGATTGCAGTCATCAAATCTTTTAGATCCAAGGTGGCTTGTAAATGA 1062 0.4284 MVLENDQNGYNTTPWLKADEIGTSASNEFYQSDHVKVENSICGETTSNEETAVSDCESGVSGSYCVQQHHLFDEGFVRLAEGDRVHDLVRTRFIRSLGMLGERTEVVAIHRNACSSVMAQARIQSFQVYMRAEEKRRHGNANVKYAWYGTSGKEEIGVIISHGFGHGGKSQNNNGLFGSALYLSPDDSPLESVKSSTVDEDGIRHLLLCRVILGKPELVHPGSDQRYPSSEEYDSGVDSLSAPKKYIIWCARMNTHILPEYVISFKVPSMKGLVKFEETFRKPSSPWMPFPTLISVLSKFLPPPTIALISKFHKDHREKKISREELVQKVRQIAGDKLLIAVIKSFRSKVACK 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0792 353 ProSiteProfiles PARP catalytic domain profile. 60 285 IPR012317 GO:0003950
Sto12g0792 353 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4 47 351 - -
Sto12g0792 353 Gene3D - 75 267 - -
Sto12g0792 353 Pfam Poly(ADP-ribose) polymerase catalytic domain 132 221 IPR012317 GO:0003950
Sto12g0792 353 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 47 351 IPR044964 -
Sto12g0792 353 SUPERFAMILY ADP-ribosylation 77 267 - -
Sto12g0792 353 Pfam RCD1-SRO-TAF4 (RST) plant domain 282 347 IPR022003 -
Sto12g0792 353 ProSiteProfiles RST domain profile. 281 352 IPR022003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0792 Sto-Chr12 5005856 5007505 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0792 - - pper:18777257 401.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1419 3 10363225 10372981 Sto12g0792 12 5005856 5007505 CCT
Sto12g0792 12 5005856 5007505 Sto12g0792 12 5005856 5007505 ECH