Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1416 TTGACAAAGGCTACAGGTGGTGGAGCCTATAAGTTTACTGATCTTTTCAAAGAAAGACTTGGGGTTAGTCTTGACAAAGAAGATGAAATGGGCTGTCTTGTGTCAGGAGCAAATTTCTTGCTTAAGGCAATTCGACATGAAGCTTTCACTCATATGGAGGGCCAAAAAGAGTTTGTTCAAATTGACCCTAATGATTTGTTTCCCTATCTTCTAGTTAATATTGGATCTGGTGTTAGTATGATCAAGGTTGATGGCGATGGGAAATTTGAGAGGGTCAGTGGCACAAATGTTGGTGGTGGTACTTATTGGGGCTTGGGAAGACTTTTAACAAAGTGCAAGagttttgatGAGTTGCTTGAGCTGAGTCAAAAAGGAGATAATAGAACTATTGATATGCTTGTTGGGGACATTTATGGTGGCATGGACTACTCCAAGATTGGCCTGTCAGCTGCAACCATTGCTTCAAGTTTTGGCAAGACTATATCAGAAAAAAAGGAACTTGAAGACTACAGACCTGAAGATATCTCACTCTCTCTTCTGCGAATGATTTCATACAATATTGGCCAGATATCTTACTTGAATGCATTGCGATTTGGGCTGAAGCGTATCTTTTTTGGAGGATTTTTTATACGGGGTCATGCCTATACCATGGACACTATTTCTTTTGCAGTTCATTTCTGGTCTAAGGGTACAGCACAAGCAATGTTTTTGCGACATGAAGGATTCCTGGGAGCTCTAGGTGCATTTATGAGCTATGAAAAGCATGGTTTAGATGACCTCATGGTGCATCAGTTGGTTGAAAGATTCCCAATGGGTGCCCCATATACAGGAGGCCAGATACATGGTCCACCACTTGGAGATTTGAATGAGAAGATTTCGTGGATGGAGAAGTTTCTACGGAAAGGAACTGAGATAACTGCACCCGTGCCAATGATTCCACCTGGAACTACTGGACTCGGGGGTTTTGAAGTTCCTTTGTCAAAAGGAAGTACTCTACGATCTGATGCAAGTGCTCTAAATGTTGGTGTTCTCCATCTAGTACCAACTTTGGATGTGTTTCCATTATTAGCTGACCCTAAAACGTATGAGCCTAATACTATTGATCTCTCAGATCCCGGTGAATTAGAATATTGGTTCACCATTTTGTCAGACCACTTGCCAGATCTTGTGGACAAGGCTGTAGCAAGTGAAGGTGGAACAGATGATGCCAAAAGAAGGGGTGATGCTTTTGCTCGGGCATTTTCTGCTCACTTGGCAAGGTTGATGGAAGAACCTGCTGCATATGGGAAGTTAGGCTTGGCCAATCTATTGGAAATGAGAGAAGAATGCTTGAGAGAATTCCAGTTTGTTGATGCATATAGAAGTATAAAGCAGaggGAAAATGAGGCTTCACTTGCTGTTTTACCTGACTTGTTGATGGAGCTTGACAGTATGGATGAGGAAACAAGACTGCTTACTCTAATTGAAGGTGTTCTTGCTGCAAACATTTTTGATTGGGGATCTCGTGCATGTGTGGATCTTTATCATCAAGGAACAATTATTGAAATTTACAGAATGAGTCGCAATAAAATGCAGAGACCTTGGCGGGTGGATAATTTTGATGTCTTCAAAGAAAGAATGTTAGGTACTGGAGACAGAAAACCTCCCCCACTCAAGAGAGCTTTGCTCTTTGTCGATAATTCGGGCGCTGACATTGTCCTAGGGATGCTTCCCCTGGCACGGGAGCTCCTTCGTCGTGGAACTGAAGTGGTTCTGGTTGCAAATTCCCTTCCCGCATTAAATGATGTAACTGCAATGGAGCTTCCAGACATTGTAGCGGAGGCTGCCAAGCACTGTGACATTCTTAGGCGAGCTGCCGAAGCCGGAGGCTTGCTTGTGGATGCGATGATTAACACCCTAGACAGTTCTAAAGAAAGTTCATCTTCAGTTCCCTTGATGGTTGTCGAAAACGGATGTGGGAGTCCGTGTATAGACTTAAGACAGGTCAGCTCCGAGTTGGCTGCTGCTGCAAAAGACGCTGACTTGATAATTTTGGAAGGGATGGGTAGATCTCTTCATACCAACCTCAATGCTCGGTTTAAGTGTGATGCTTTGAAGCTTGCAATGGTGAAAAATCCGAGGCTAGCTGAGAAGTTGGTTAATGGGAAGATATACGATTGTGTTTGCAAATATGAGCCTGCTAGTTGA 2187 0.4298 LTKATGGGAYKFTDLFKERLGVSLDKEDEMGCLVSGANFLLKAIRHEAFTHMEGQKEFVQIDPNDLFPYLLVNIGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQKGDNRTIDMLVGDIYGGMDYSKIGLSAATIASSFGKTISEKKELEDYRPEDISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVHFWSKGTAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGQIHGPPLGDLNEKISWMEKFLRKGTEITAPVPMIPPGTTGLGGFEVPLSKGSTLRSDASALNVGVLHLVPTLDVFPLLADPKTYEPNTIDLSDPGELEYWFTILSDHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARLMEEPAAYGKLGLANLLEMREECLREFQFVDAYRSIKQRENEASLAVLPDLLMELDSMDEETRLLTLIEGVLAANIFDWGSRACVDLYHQGTIIEIYRMSRNKMQRPWRVDNFDVFKERMLGTGDRKPPPLKRALLFVDNSGADIVLGMLPLARELLRRGTEVVLVANSLPALNDVTAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMINTLDSSKESSSSVPLMVVENGCGSPCIDLRQVSSELAAAAKDADLIILEGMGRSLHTNLNARFKCDALKLAMVKNPRLAEKLVNGKIYDCVCKYEPAS 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1416 728 PANTHER PANTOTHENATE KINASE 3 650 IPR004567 GO:0004594|GO:0005524|GO:0015937
Sto3g1416 728 SUPERFAMILY Actin-like ATPase domain 19 252 IPR043129 -
Sto3g1416 728 PIRSF PanK_long 1 728 IPR015844 GO:0004594|GO:0015937
Sto3g1416 728 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 529 726 - -
Sto3g1416 728 SUPERFAMILY AF1104-like 344 726 IPR036075 -
Sto3g1416 728 Pfam Damage-control phosphatase ARMT1-like domain 435 713 IPR002791 -
Sto3g1416 728 PANTHER PANTOTHENATE KINASE 2 3 650 - -
Sto3g1416 728 Gene3D - 47 232 - -
Sto3g1416 728 TIGRFAM panK_eukar: pantothenate kinase 3 251 IPR004567 GO:0004594|GO:0005524|GO:0015937
Sto3g1416 728 Pfam Fumble 3 250 IPR004567 GO:0004594|GO:0005524|GO:0015937
Sto3g1416 728 Gene3D - 364 450 IPR035073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1416 Sto-Chr3 10341164 10350192 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1416 K24265 - qsu:112040755 1348.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1416 3 10341164 10350192 Sto12g0788 12 4942004 4944994 CCT
Sto3g1416 3 10341164 10350192 Sto12g0788 12 4942004 4944994 ECH
Sto3g1416 3 10341164 10350192 Sto3g1416 3 10341164 10350192 ECH