Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0788 ATGGCACCTACTGCCTGCAATTGCATACACCGGTCGAGTTCAAGGCCTCAGCTTGATGTTAGCAAAGCTGAAATTCGAGGAAATGTGGAGGACAAGTATCCATCAATTTTGTTACCTAACCAATCTGATGATATATCTCACTTGGCTCTTGACATTGGAGGATCTCTGATAAAGTTGGCGTACTTTTCAAGACACGAAGATCAATCAGTCCgtgataaaagaaagagaagtatTAATGAGCCAATGGGAATTTCTAATGGAAGCAGAAGAAGCTATCCTATTCTGGGTGGCAGGCTTCACTTTGTGAAATTTGAGACAAGCAAGATTAACGAGTGCTTAGACTTCATTTATTCAAAGCAGCTTCATTGTGGTGGTGATGGTTTGGAATCATGTTACTCTAGTGCTGTGCCTGACCAAAATTCCATAATTAAGGCTACAGGTGGTGGATCCTACAAGTATGCTGATCTTTTTAAGGAAAGACTTGGTGTTAGCATTGACAAAGAAGATGAAATAGATTGTCTTGTGGCAGGAGCAAACTTTTTGCTTAAGGCAATTCATCATGAAGCTTTCACACACATAGAGGGCCAGAAAGAGTTTGTACAAATTGACACCAATGATTTGTTTCCTTATCTTCTAGTTAATATTGGATCTGGGGTTAGTATGATTAAGGTTGATGGGGATGGAAAATTTGAGAGGGTTAGTGGGACAAATGTTGGTGGTGGTACTTATTGGGGCTTGGGAAGACTATTAACAAAGTGCAAGAGTTTTGATGAGTTGCTTGAGCTCAGTCAGAAAGGAGATAATAGAACCACTGACATGCTTGTTGGGGACATCTATGGTGGTATGGACTACTCAAAGATTGGCCTATCAGCTTCAACCATTGCTTCAAGTTTTGGCAAGACTATATCAGAAAAAAAGGAGCTTGAAGGTTACAAACCTGAAGATATTTCACTTTCTCTTCTACGAATGGTTTCATACAACATTGGCCAGATATCTTACTTGACCGCGTTGCAATTTGGCTTGAAGCGTATCTTTTTTGGAGGATTTTTTATAAGGGGTCATGCATATACCATGGACACTATTTCCTTTGCAGTTCATTTCTGGTCTAAAGGGGAAGCGCAAGCAATGTTCTTGCGACATGAAGGATTTCTGGGTGCTTTAGGTGCATTTATGAGCTATGAAAAGCATGGTTTAGACGACTTCATGGTGCATCAGGGGGGAATATCCATGGCCCACCCACTTGGAGATTTGAATGAGAAGGCAAGTGCTAGGAGCTGGAACATTTGA 1287 0.404 MAPTACNCIHRSSSRPQLDVSKAEIRGNVEDKYPSILLPNQSDDISHLALDIGGSLIKLAYFSRHEDQSVRDKRKRSINEPMGISNGSRRSYPILGGRLHFVKFETSKINECLDFIYSKQLHCGGDGLESCYSSAVPDQNSIIKATGGGSYKYADLFKERLGVSIDKEDEIDCLVAGANFLLKAIHHEAFTHIEGQKEFVQIDTNDLFPYLLVNIGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQKGDNRTTDMLVGDIYGGMDYSKIGLSASTIASSFGKTISEKKELEGYKPEDISLSLLRMVSYNIGQISYLTALQFGLKRIFFGGFFIRGHAYTMDTISFAVHFWSKGEAQAMFLRHEGFLGALGAFMSYEKHGLDDFMVHQGGISMAHPLGDLNEKASARSWNI 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0788 428 Gene3D - 269 382 - -
Sto12g0788 428 PANTHER PANTOTHENATE KINASE 1 409 IPR004567 GO:0004594|GO:0005524|GO:0015937
Sto12g0788 428 SUPERFAMILY Actin-like ATPase domain 160 393 IPR043129 -
Sto12g0788 428 Gene3D - 39 201 - -
Sto12g0788 428 PANTHER PANTOTHENATE KINASE 2 1 409 - -
Sto12g0788 428 Pfam Fumble 47 391 IPR004567 GO:0004594|GO:0005524|GO:0015937
Sto12g0788 428 SUPERFAMILY Actin-like ATPase domain 45 188 IPR043129 -
Sto12g0788 428 TIGRFAM panK_eukar: pantothenate kinase 47 392 IPR004567 GO:0004594|GO:0005524|GO:0015937
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0788 Sto-Chr12 4942004 4944994 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0788 K24265 - gmx:100781580 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1416 3 10341164 10350192 Sto12g0788 12 4942004 4944994 CCT
Sto3g1416 3 10341164 10350192 Sto12g0788 12 4942004 4944994 ECH
Sto12g0788 12 4942004 4944994 Sto12g0788 12 4942004 4944994 ECH