Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1415 ATGCTGAGGTTCGCGTCCAAGAGGCTTTTCGGAATCGCGTCACCGGAGCCGCCGTTTCCGGCGGCGGCATCCCAGCTTCTGCCTCGTTCTTACCACGAGAGGGTTGTGGATCACTACAACAACCCTCGGAACGTTGGATCCTTCGAGAAGGATGATCCCAACGTGGGTACGGGGTTGGTTGGCGCTCCTGCTTGCGGGGATGTGATGAAACTCCAGATTAAGGTTGATGAGGAGACCGGAAAGATTGTGGATGCTCGATTCAAGACCTTCGGGTGTGGATCGGCCATTGCCTCTTCCTCTGTAgGATATGAGCTTAAGATAACCATGGTGTGCTATCCTTGGGATAGCCCTCTCTTTCTTTCTACGGAATGGGTGAAGGGAAAGCAAATGGAGGATGTTCTTTCCATTAAGAACACTGAAATTGCAAAGCACCTTTCACTTCCGCCTGTCAAGCTTCACTGCAGCATGCTAGCTGAGGATGCCATTAAAGCCGCTGTTAAAGACTATGAAGCTAGGCGTGCCAAGGAAAAGTGTAATGGAGGTGCATCTTCTGGAGAGAAGGCTTCCACTGTTTGA 576 0.5104 MLRFASKRLFGIASPEPPFPAAASQLLPRSYHERVVDHYNNPRNVGSFEKDDPNVGTGLVGAPACGDVMKLQIKVDEETGKIVDARFKTFGCGSAIASSSVGYELKITMVCYPWDSPLFLSTEWVKGKQMEDVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEARRAKEKCNGGASSGEKASTV 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1415 191 Gene3D - 30 181 - -
Sto3g1415 191 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 23 187 IPR002871 GO:0005506|GO:0016226|GO:0051536
Sto3g1415 191 CDD IscU_like 31 165 IPR002871 GO:0005506|GO:0016226|GO:0051536
Sto3g1415 191 Pfam NifU-like N terminal domain 31 103 IPR002871 GO:0005506|GO:0016226|GO:0051536
Sto3g1415 191 Pfam NifU-like N terminal domain 121 175 IPR002871 GO:0005506|GO:0016226|GO:0051536
Sto3g1415 191 SUPERFAMILY SufE/NifU 31 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1415 Sto-Chr3 10333924 10335800 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1415 K22068 - csin:114263428 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1415 3 10333924 10335800 Sto12g0786 12 4935045 4937078 CCT