Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0786 ATGTTGAGGCTCGTTTCGAAGCGAATTTTGGGAGCAGTTTCGCGGGATTTGCCGCCGCCGGCGGTTCTGCCGCGATTCTATCACGAGAGGGTTGTTGATCACTACAACAACCCACGGAATGTTGGATCCTTTGACAAGAATGACCCCACCGTCGGTACGGGCTTGGTTGGAGCTCCTGCTTGTGGGGATGTCATGAAGCTTCAGATTAAGGTTGATGAGAAGACTGGAAAGATTGTGGACGCTCGATTCAAGACTTTCGGCTGTGGTTCCGCTATTGCCTCTTCGTCTGTGGCTACTGAATGGGTAAAGGGAAAGCAAATGGAGGAAGTTTTGTCTATTAAGAACACTGAAATTGCAAAGCATCTTTCACTTCCTCCAGTTAAGCTTCACTGCAGCATGCTTGCTGAGGATGCTATTAAAGCAGCTGTTAAGGACTATGAAGCTAAGCGTGCCAAGTCAACTGCCAGTCAGGAGGAAACATCTGGAGAGAAGGCCGCCACTGCTTGA 507 0.4931 MLRLVSKRILGAVSRDLPPPAVLPRFYHERVVDHYNNPRNVGSFDKNDPTVGTGLVGAPACGDVMKLQIKVDEKTGKIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRAKSTASQEETSGEKAATA 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0786 168 Pfam NifU-like N terminal domain 27 152 IPR002871 GO:0005506|GO:0016226|GO:0051536
Sto12g0786 168 Gene3D - 26 168 - -
Sto12g0786 168 SUPERFAMILY SufE/NifU 26 152 - -
Sto12g0786 168 CDD IscU_like 27 142 IPR002871 GO:0005506|GO:0016226|GO:0051536
Sto12g0786 168 TIGRFAM iscU: FeS cluster assembly scaffold IscU 27 150 IPR011339 GO:0005506|GO:0016226|GO:0051536
Sto12g0786 168 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 1 164 IPR002871 GO:0005506|GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0786 Sto-Chr12 4935045 4937078 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0786 K22068 - gmx:100806169 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1415 3 10333924 10335800 Sto12g0786 12 4935045 4937078 CCT