Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1407 ATGCAATCCTTAAGCGTGAAGGCTTTCGTGGATCTGCGTCTACCGGCTCCGGGAGGCTCGGGTTTTGGCTTTGGGGAATCTGAGACGGGGGTGAGGAGGCTGTGTGTGAATTCCAGAAGCATCGGGAGGCGGAATGGCGGGATCATAGCGTGTGCTGCTGCTgaaaggaatgggaatgggaggGGAGAGAGTCGGAGTATGAGTCAGAGTCCGAGCTCTACTAGTTCGAGCTCGTTTCTTTCTCGGACCCACAGCTATGCACTCTTGAAGCAGCAATTGGAGGTCGCTGCGAGATCCGAGGATTACAAAGAAGCAGCGAGGATTCGGGATTCACTGAAGTTATTCGAGGAAGAGGAGCCAGTTCTGCGTTTGCGAAGATTAATTAAGGAAGCGGTTGCTGATGAGAGGTTTAAGGATGCAGCAAGGTATCGAGATGAGCTAAAAGAAATTGCCCCTCACTCTCTCTTGAAATGTTCCAGTGATGCCACAACCTTGGGAATCAGGGTTCAAGTTAGGAGTGTATATATAGAGGGCAGAAGTCAACCTTCAAAAGGGCAATACTTCTTTGCATACAGAATAAGAATTACCAATAATTCCGACCACCCTGTTCAACTTATTAGAAGGCATTGGATTATAACTGATGGTAATGGAAAAACAGAAAATGTATGGGGGATGGGGGTTGTCGGTGAACAGCCAGTTATACTTCCTAGGACTGGTTTTGAGTATTCATCAGCATGCCCATTGTGCACACCGAGTGGTAGAATGGAAGGTGACTTTGAGATGATACATGTTGATCGACCAGGCTCTCGATCATTTAATGTGGCCATTGCCCCCTTTTCACTCTCTCTTCTTGGAGATGATGATGGCCACACCATTTGA 879 0.4653 MQSLSVKAFVDLRLPAPGGSGFGFGESETGVRRLCVNSRSIGRRNGGIIACAAAERNGNGRGESRSMSQSPSSTSSSSFLSRTHSYALLKQQLEVAARSEDYKEAARIRDSLKLFEEEEPVLRLRRLIKEAVADERFKDAARYRDELKEIAPHSLLKCSSDATTLGIRVQVRSVYIEGRSQPSKGQYFFAYRIRITNNSDHPVQLIRRHWIITDGNGKTENVWGMGVVGEQPVILPRTGFEYSSACPLCTPSGRMEGDFEMIHVDRPGSRSFNVAIAPFSLSLLGDDDGHTI 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1407 292 MobiDBLite consensus disorder prediction 58 79 - -
Sto3g1407 292 PANTHER OS05G0170800 PROTEIN 28 288 - -
Sto3g1407 292 ProSiteProfiles UVR domain profile. 118 153 IPR001943 GO:0005515
Sto3g1407 292 MobiDBLite consensus disorder prediction 61 79 - -
Sto3g1407 292 SUPERFAMILY ApaG-like 163 282 IPR036767 -
Sto3g1407 292 Pfam ApaG domain 179 262 IPR007474 -
Sto3g1407 292 ProSiteProfiles ApaG domain profile. 161 288 IPR007474 -
Sto3g1407 292 Pfam UvrB/uvrC motif 123 150 IPR001943 GO:0005515
Sto3g1407 292 Gene3D ApaG domain 157 290 IPR036767 -
Sto3g1407 292 ProSiteProfiles UVR domain profile. 83 118 IPR001943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1407 Sto-Chr3 10281738 10284735 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1407 - K06195 tcc:18603925 397.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1407 3 10281738 10284735 Sto12g0778 12 4885862 4888464 CCT
Sto3g1407 3 10281738 10284735 Sto3g1407 3 10281738 10284735 ECH