Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1382 ATGCTATCAGAGGAATATGGTGGGCGTGTGGAGCTAGCAAAAGCATATTACAAAGCACTTACCACTTCGGTGAAGAAGCATTTCAAAGGGAACGGAGTCATAGCTAGCATGGAGCACTGTAATGACTTCTTTCTCCTCGGCACAGAAGCCATAACACTTGGCCCTGTTGGGGATGATTTTTGGTGCACCGATCCGTCAGGGGATCCAAACGCCTCTCGAGCCATCTCTGGTGGGCCCATCTACGTCCGCGATTGCGTCGGAAAGCACAACTTTAAGCTACTGAAGCGTCGTATCGACTATGTCAACGACATGTCGTTAGATCTCCTCAGCAGACTCAGCGCCACGTGTCCACAACTGCATTTTGCTCGTTCCGAATCTAACAGCTCCTTCGAATCAGAAAGCGCTGTAGCCGCAAGACAACTCGATGGCGCCGACGCCGCCGATGACAAGTATGAAAGCGATGAATACGGTGCGTTTAAGGAAGACTTCCGCTACGGTGTTAATTTCCAGCCTAGTCCTCCTCTCCGATCTTCGCAGTCACTCACTTCCTCTTTGCCTCTCAAAGGCAGGGATTTCGGGGAGAATAGTGATTCAGCAACACGGGGTTGTGGAACTTCTTATGGTGCTGCTATTATTTCTATGATCAATCGGGGAATGAAAGAGCATTCTAATCATTTACTTCGTGCAGCACATGGTATCAGTGCGCAAATAGCTCAACTAGAGGCTAGGACGCGCCAATTGGAGGGTTTGATTGGTAACTTGAAGGATTCAACTGAATTTTATCACAGAAGAGCAGAAAGAAGGCTCGGAGAGGTGGAGGATATGATGATTGAGGTTCAAGGAAGTATTCAAGACTTGAAAGATAAACAAAAAATAGCAGAAATTCAGCTGCAGCTAGCAAAGCTTCAGCAAATTAAAGCTGATTCACAATCCAAACACCAAAACAGGAATGTTCAGAATAAATTGGTTCAGCAACAAGTGTCATATGTCCATCAGCAGGACCACCAACCACATCCAAGTCCTGCTGTTTGCCAGCAGAAACTCTGTGATATTGCTTCTCATGATCCTCGAAACTCCGTCCAAACTTCATTGCAAACACCTGCAACAACAGCAACGCAAACTGTGGGGCAAAACCAACCCCGCTTTATTCAACCATTTCAAACATATTACCAATTCCCGGTACCGGCACCGGCACCAGATATGCTTCCAACTCAGTCATCAATGACACAATACCAACCTTATATGCATTCATCTTTTTCAGAGTCATCCCAGTTGGCTCGACCACAGACTCCCCACGGTGTTCGTCATTCTTCTGTCTATCAAGTCAATCAGAATCCTCAAGGTCCAATTTACATGCCATCAGAAGATTCTCGATTTCCCGTCTCAGCTCCTCAACAATTTAATGTGGTTTCtactcaatacataaaaaatcaACGACCAGGTAGTACAGTGACAACTCCGGGGCATTCTAATCAACCTAGAAGCTATGACTCAAACGATCAATATCGGGAAGGATCTCCTCTGCAATACTGGGGTTCGACCAGAAAAACTTCAGCTCTGCCCACACATTCTGTGACACCGAAAGTGCTGCCTCGTGCACTACCAATGGCCGTGGATGTGAATGAGGCATCAAGTTCTGGTGGAACTGAAAGGAGTGTGTCAATTGAAGATATTGTTGAAAATGCTGTAGCAATGGGATTTCGGAGGGACACAGTGAAAGCGACAGTTAAAAAACTGACCGAGAATGAGCAAAGGGTGGACCTTAATCTGGTGTTAGATAGTCTGATAAGTAGTGCAGAAATTCAGAGATAG 1812 0.4564 MLSEEYGGRVELAKAYYKALTTSVKKHFKGNGVIASMEHCNDFFLLGTEAITLGPVGDDFWCTDPSGDPNASRAISGGPIYVRDCVGKHNFKLLKRRIDYVNDMSLDLLSRLSATCPQLHFARSESNSSFESESAVAARQLDGADAADDKYESDEYGAFKEDFRYGVNFQPSPPLRSSQSLTSSLPLKGRDFGENSDSATRGCGTSYGAAIISMINRGMKEHSNHLLRAAHGISAQIAQLEARTRQLEGLIGNLKDSTEFYHRRAERRLGEVEDMMIEVQGSIQDLKDKQKIAEIQLQLAKLQQIKADSQSKHQNRNVQNKLVQQQVSYVHQQDHQPHPSPAVCQQKLCDIASHDPRNSVQTSLQTPATTATQTVGQNQPRFIQPFQTYYQFPVPAPAPDMLPTQSSMTQYQPYMHSSFSESSQLARPQTPHGVRHSSVYQVNQNPQGPIYMPSEDSRFPVSAPQQFNVVSTQYIKNQRPGSTVTTPGHSNQPRSYDSNDQYREGSPLQYWGSTRKTSALPTHSVTPKVLPRALPMAVDVNEASSSGGTERSVSIEDIVENAVAMGFRRDTVKATVKKLTENEQRVDLNLVLDSLISSAEIQR 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1382 603 Pfam Raffinose synthase or seed imbibition protein Sip1 71 97 IPR008811 -
Sto3g1382 603 Pfam Raffinose synthase or seed imbibition protein Sip1 1 70 IPR008811 -
Sto3g1382 603 Coils Coil 283 312 - -
Sto3g1382 603 Pfam UBA-like domain (DUF1421) 555 596 IPR010820 -
Sto3g1382 603 Coils Coil 237 257 - -
Sto3g1382 603 MobiDBLite consensus disorder prediction 477 504 - -
Sto3g1382 603 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 166 598 - -
Sto3g1382 603 PANTHER OF P53 PROTEIN 1, PUTATIVE-RELATED 166 598 - -
Sto3g1382 603 MobiDBLite consensus disorder prediction 170 199 - -
Sto3g1382 603 MobiDBLite consensus disorder prediction 171 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1382 Sto-Chr3 10056560 10059909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1382 1 98 Glycoside Hydrolase AT5G40390 57.143 4.88e-43 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1382 - - zju:107418420 214.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1382 3 10056560 10059909 Sto12g0757 12 4731536 4735308 ECH
Sto3g1382 3 10056560 10059909 Sto3g1382 3 10056560 10059909 ECH