Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0757 TTGGCCAAAAATAATGCCCTCCAACAAACGGAGCACCTCCATGATGATTTTCCATCCTCCATAAAGCTTGAAGCATCCACCTTCCTCGCCAATGCCCACCCAATTCTCACTCAAGTCCCTTCAAACATAGTCGCAACCCCTATTCCTAATTCAACCAACCATCAGAATACCGTCGGTTGCTTCGTGGGCTTCGACGCCGATCGGCCCAAAAACCGATACGTGGTTCCCATCGGAAAGCTCAGGGGGATCCGGTTCATGAGCATATTCAGGTTCAAGCTATGGTGGAGCACCCATTGGGTGGGAAGTAAAGGGCGTCACGTGGAGCACGAGACCCAAATGATGATGTTAGAGAACAGTCATAACACCGGCCGTCCCTACGTcctccttcttcctctcctcGAAGGTCCTTTTAGAGCTTGTCTCCAACCTGGGATTGATGATTACGTGGACATTTGCTTGGAGAGTGGCTCCACGCGCGTCTCTGGGTCCACTACCTTCTTCAGAGCCTGCTTGTACATCCACGTGGGTAATGATCCTTACGCTTTAATGAAGGAAGCTATGATAGTGATGAGGCACCATCTCGGGACGTTCAGGCTTCTCGAAGAGAAAACCCCACCGGGTATAGTGGATAAGTTTGGGTGGTGCACATGGGACGCGTTTTATCTCAAGGTGCACCCAAAGGGTGTTCGGGAAGGGGTGAGAGGCCTAGCGGAGGGTGGGTGCCCTCCAGGTTTTGTCGTAATCGACGATGGTTGGCAAAGCTTTTGTCATGATGACGAACCCGTGAGTGATCGAGGAAGCCTGAATTGTTCTATACCTGGTGAGCAAATGTTGAATAGGCTCGTGAGTTTTGAAGAAAATAGTAAGTTTAAGGAGTATCGTAGTGGAAGGAGTCCTTCGGATAAAGGGCTGGGTGCCCTTGTTAGGGACCTGAAGGAGGAGTTTGAGAGTGTAGAGCATGTGTATGTTTGGCATGCGTTTTGTGGGTACTGGGGTGGGCTTAGGCCCAATGTGCCAGGAATGCCTGAGTCCAAGGTGGTCTCTCCGAAGCTTTCGGAAGGTGCGGAGAAAACGATGACGGATCTGGCGGTGGTGAAGATAATGGAAGTAGGGGTGGGATTGGTGGCTCCCGAAGAGGCTCACAAGTTGTACGATGGACTTCATTCTCACCTGGAATCCGTTGGTATTGACGGCGTCAAGATTGACGTCATACACCTTCTGGAGACGGTATCAGAGGAATATGGAGGACGCGTGGAACTCTCCAAAGCCTATTACAAAGCCCTCACTGCTTCTATGAGGAAACATTTCAAAGGCAACGGCGTCATCTCTAGCATGCAGCAATGCAACGACTTCATGTTCCTTGGTACCGAAACCATATCACTAGGACGAGTTGGTGATGATTTTTGGTGCACTGACCCTGCGGGAGATCCAAACGGTACGTTCTGGCTGCAAGGTTGTCACATGGTGCATTGCGCGTATAACAGCTTGTGGATGGGAAATTTCATACACCCAGACTGGGACATGTTCCAATCCGATCATGCTTGTGCTGAATTCCACGCTGCTTCTCGAGCCATCTCAGGTGGACCTATTTATGTGAGTGACTCTGTTGGGAAACACAACTTCGACCTCCTCAAGAAGCTGGTTCTCCCTGATGGTTCAATCCTAAGGTGCCAACATTACGCCCTTCCTACTAGAGACTGCTTGTTCCAAGACCCCTTGCACGATGGCAAAACCATGCTCAAAATCTGGAATCTCAACAAATACACAGGGGTTTTGGGTGTGTTTAATTGCCAAGGAGGAGGGTGGTGCCCCATTACTAGGCGAAACAGAAGTGCGTGTGAGTATTCACAGTGTGTGAATTGCTTTGTGACTCCCAAGCACGTTGAATGGAAAAACGGGAAGAACCCAATATGTATGGAAGGGGTGGATTTGTTCGCTGTGTATATGTATAAGGAAGACGAATTGAAGCTGTTGAAGTGGTCGGAAGGTGTGGAGATTTGGCTTCAACCCTTTAACTATGAACTCTTCACAATTTCTGCAGTCACAGTGATACCTAAAACATCAATTCAGTTTGCTCCAATTGGGTTGGTGAACATGCTGAACTCAGGTGGGGCAATTCAGAGTGTGGAATTTGATGAGAATCATGAAAAGATGATGATTGTGAGAATTGGGGTGAGAGGGGAAGGGGATATGAGGGTGTTTGCTTCAGAGAAGCCTGTGAGTTGTAAAATTGATGGAGTGAAGGTTGGATTTGGTTATGAGGATAATATGGTGAGGATTCATGTTCCGTGGCCCACTTCTTCACCATTATCAGTGGTGGAGTATTTGTTCTGA 2334 0.4816 LAKNNALQQTEHLHDDFPSSIKLEASTFLANAHPILTQVPSNIVATPIPNSTNHQNTVGCFVGFDADRPKNRYVVPIGKLRGIRFMSIFRFKLWWSTHWVGSKGRHVEHETQMMMLENSHNTGRPYVLLLPLLEGPFRACLQPGIDDYVDICLESGSTRVSGSTTFFRACLYIHVGNDPYALMKEAMIVMRHHLGTFRLLEEKTPPGIVDKFGWCTWDAFYLKVHPKGVREGVRGLAEGGCPPGFVVIDDGWQSFCHDDEPVSDRGSLNCSIPGEQMLNRLVSFEENSKFKEYRSGRSPSDKGLGALVRDLKEEFESVEHVYVWHAFCGYWGGLRPNVPGMPESKVVSPKLSEGAEKTMTDLAVVKIMEVGVGLVAPEEAHKLYDGLHSHLESVGIDGVKIDVIHLLETVSEEYGGRVELSKAYYKALTASMRKHFKGNGVISSMQQCNDFMFLGTETISLGRVGDDFWCTDPAGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSDHACAEFHAASRAISGGPIYVSDSVGKHNFDLLKKLVLPDGSILRCQHYALPTRDCLFQDPLHDGKTMLKIWNLNKYTGVLGVFNCQGGGWCPITRRNRSACEYSQCVNCFVTPKHVEWKNGKNPICMEGVDLFAVYMYKEDELKLLKWSEGVEIWLQPFNYELFTISAVTVIPKTSIQFAPIGLVNMLNSGGAIQSVEFDENHEKMMIVRIGVRGEGDMRVFASEKPVSCKIDGVKVGFGYEDNMVRIHVPWPTSSPLSVVEYLF 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0757 777 Pfam Raffinose synthase or seed imbibition protein Sip1 24 758 IPR008811 -
Sto12g0757 777 PANTHER - 6 777 IPR008811 -
Sto12g0757 777 Gene3D Aldolase class I 206 548 IPR013785 -
Sto12g0757 777 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE-RELATED 6 777 - -
Sto12g0757 777 SUPERFAMILY (Trans)glycosidases 206 557 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0757 Sto-Chr12 4731536 4735308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0757 16 777 Glycoside Hydrolase AT5G40390 60.283 0.0 986
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0757 K06617 - gmx:100798883 1212.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1382 3 10056560 10059909 Sto12g0757 12 4731536 4735308 ECH
Sto12g0757 12 4731536 4735308 Sto12g0757 12 4731536 4735308 ECH