Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1381 ATGGCGAAGCTTCCTTCTATGTTCTCTTTGGGGAACTTGCTGGTGTTGTCTCTGGCTTTGAATCTGAGTTTGATACTGAGAATGGTGTATGAGAGGGAAGAAGGGTACAGAGGGAAAGGGTCTTCTTGCTTGAAGAAACAGAGAGGGTCATTAATGGCGGATTCTGGTCATAGGGGTGCTTTGAATCTGAGTTTGGGTGATGATTCCGCTCGTGCGAGTCATTCACAAGGCAGAGAAAGAATAATCAATCTCGATCATGGGGATCCCACAGTGTATGAAACATTTTGGCGACAAATGGGAGACAAGACGAGCATTACAATCCCAGGATGGCAATCCATAAGCTATTTCTCGGATGCTACAAATATTTGCTGGTTTCTAGAGCCAGAGTTTGCAAAGGAGGTGGTGAGGCTACACAATGTGGTAGGCAATGCAGTCACAGAAGGACGTCATGTTGTGGTTGGGACAGGTTCTTCTCAGCTCTTTCTGGCTGCTCTCTATGCTCTGTCTCCTCGTGACGCAGCTGAACCAATCAGCGTTGTTTCTGCCGCTCCTTATTACTCGTCATACCCATCAATGACAGATTACCAGAAATCAGGACTGTACAAATGGGGTGGGGATGCAGAGAGTTATGAGAAAGAAGGACCATACATTGAGCTTGTGACTTCCCCAAATAACCCAGATGGGTTTGTGAGAGGGTCTGTGGTGAACAGAAGGCAAGGGCTATTGGTTCATGACCTTGCCTACTATTGGCCCCAATACACTCCTATCTCTTCCCCTGCAGATCACGACCTCACCCTCTTCACTGTCTCCAAATCCACTGGCCATGCAGGAATGCGAATTGGGTGGGCTCTTGTGAAAGACGAAGAGGTGGCTAAGAAGATGACCAAGTTCATAGAGCTGAATACAATAGGAGTGTCTAAGGATTCGCAGCTGAGGGCAGCGAAGGTGTTGAGGGCAGTGTCTGATAGCTGCGaccaagaaagagaaggagACTCATTCTTCAACTTCAGCTACAACAAAATGGCTCACAGGTGGCACCACCTTAGAGCTGCTGTTCAACGTAGTGGAATGTTCAGTTTGCCATCCTTCTCTCCTGCTTTCTGCACCTTCTTCGCTCAGGTTTTGGAGCCCCAACCTGCTTTTGTGTGGTTGAAGTGTGAGGGAGAGATAGAGGACTGTGAGAGTTATCTTCGAGGGCACAACATCTTAACACGAAGTGGGAAGCACTTTGGGGTTAGCCCCAAATATGTTAGAATTAGCATGCTCGACACTGACGATAATTTCACCCACTTTTTAGATAGATTGTCTGCTATCCAATCGTCCTAG 1326 0.4676 MAKLPSMFSLGNLLVLSLALNLSLILRMVYEREEGYRGKGSSCLKKQRGSLMADSGHRGALNLSLGDDSARASHSQGRERIINLDHGDPTVYETFWRQMGDKTSITIPGWQSISYFSDATNICWFLEPEFAKEVVRLHNVVGNAVTEGRHVVVGTGSSQLFLAALYALSPRDAAEPISVVSAAPYYSSYPSMTDYQKSGLYKWGGDAESYEKEGPYIELVTSPNNPDGFVRGSVVNRRQGLLVHDLAYYWPQYTPISSPADHDLTLFTVSKSTGHAGMRIGWALVKDEEVAKKMTKFIELNTIGVSKDSQLRAAKVLRAVSDSCDQEREGDSFFNFSYNKMAHRWHHLRAAVQRSGMFSLPSFSPAFCTFFAQVLEPQPAFVWLKCEGEIEDCESYLRGHNILTRSGKHFGVSPKYVRISMLDTDDNFTHFLDRLSAIQSS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1381 441 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 3 440 - -
Sto3g1381 441 Gene3D Aspartate Aminotransferase, domain 1 331 439 IPR015422 GO:0003824
Sto3g1381 441 Pfam Allinase 82 438 IPR006948 GO:0016846
Sto3g1381 441 SUPERFAMILY PLP-dependent transferases 79 436 IPR015424 -
Sto3g1381 441 CDD AAT_like 128 435 - -
Sto3g1381 441 Gene3D - 68 122 IPR037029 GO:0016846
Sto3g1381 441 Gene3D - 127 330 IPR015421 GO:0003824
Sto3g1381 441 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 3 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1381 Sto-Chr3 10045235 10050452 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1381 K16903 - gmx:100807013 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1381 3 10045235 10050452 Sto12g0755 12 4720657 4722940 CCT
Sto3g1381 3 10045235 10050452 Sto3g1381 3 10045235 10050452 ECH