Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0755 ATGTACGGAAGATATTGGCGAGAAATGGGGGAGAAGGCGAGGATTACAATTGCGGGATGGCAATCGATGAGCTATTTCTCGGGTGGGAGTGATGTTTGCTGGTTCCTAGAAGCAGAGTTAGGTGAGGAGGTGAGGAGGCTACACAGAGTGGTGGGGAATGCGGTGACAGAAGGTAGGCATATTGTTGTAGGGACAGGTTCCTCTCAGCTCATTCTCGCTGCTCTTTATGCTCTCTCTCCACGTGACGCTTCTGAACCCATCACTGTGCTATCTGCCGCACCTTATTACTCGTCGTACGCATCCATGAGTGATTACCAGAAATCAGGGCTGTACAAATGGGGTGGTGATGCAGAGAAATACGAGAAGGAAGGTCCCTACATAGAGTTGGTGACTTCTCCTAATAACCCTGATGGGCATACGAGGCGATCCGTGGTTAACCGAACCCATGGGTTTGTGGTTCATGACCTTGCCTATTATTGGCCACAATACACTCCCATATCAGCCCCTGCGGATCACGACCTTTCCCTCTTCACTCTCTCCAAAAGCACTGGCCATGCAGGAATTCGCCTGGGGTGGGCTTTAGTGAAAGACAGAGAGGTGGCGAAGAAAATGACCAAGTTTATAGAGCTGAATACAATAGGTGTATCAAAGGACTCGCAACTGAGGGCTGCAAAAATTATGAGGGTGGTGTCTGATAGTTGCGAACAACGAGAAGGTGAATCCTTCTTCGAGTTCAACTACAAAGTGTTAGTGCAGAGGTGGAAGCAACTGAGAGCAGTGGTTGAACGTAGTGGACTCTTCAGTTTACCCACATTTTCTCCTGCATTCTGCACCTTTTATGGTTTTGCGTGGTTGAAGTGTGAGTGGGAAGTAGAGGACTGCGAACTCGTCCTCAAACAACACAATATCTTAACTCGAAGTGGGAAACACTTTGGGCCGTGCGCGGCGGAGATAGTTGGCCAGCCACGTGAAGGCGGAAAGCGCGGTGACGCCGAAAGCGCCGGATGTCAAAAAGCCAGTGACGGCCAAACCAATGACGAAGGCTGCGGGGAGCAAGACGGGGCTGAAGATGACAAAGAGGGGAGAGGTGACGGCGAGACCGACGACGGTGGCGGTGAGGGTGAGGCCGGCGATCATGAGAAGAAAAGCACCGAGAGGGAGGAGGGTGGCGAGTGCTAG 1179 0.5157 MYGRYWREMGEKARITIAGWQSMSYFSGGSDVCWFLEAELGEEVRRLHRVVGNAVTEGRHIVVGTGSSQLILAALYALSPRDASEPITVLSAAPYYSSYASMSDYQKSGLYKWGGDAEKYEKEGPYIELVTSPNNPDGHTRRSVVNRTHGFVVHDLAYYWPQYTPISAPADHDLSLFTLSKSTGHAGIRLGWALVKDREVAKKMTKFIELNTIGVSKDSQLRAAKIMRVVSDSCEQREGESFFEFNYKVLVQRWKQLRAVVERSGLFSLPTFSPAFCTFYGFAWLKCEWEVEDCELVLKQHNILTRSGKHFGPCAAEIVGQPREGGKRGDAESAGCQKASDGQTNDEGCGEQDGAEDDKEGRGDGETDDGGGEGEAGDHEKKSTEREEGGEC 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0755 392 SUPERFAMILY PLP-dependent transferases 2 314 IPR015424 -
Sto12g0755 392 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 1 313 - -
Sto12g0755 392 MobiDBLite consensus disorder prediction 355 392 - -
Sto12g0755 392 CDD AAT_like 39 315 - -
Sto12g0755 392 Pfam Allinase 1 312 IPR006948 GO:0016846
Sto12g0755 392 Gene3D - 36 240 IPR015421 GO:0003824
Sto12g0755 392 Gene3D Aspartate Aminotransferase, domain 1 241 317 IPR015422 GO:0003824
Sto12g0755 392 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 1 313 - -
Sto12g0755 392 MobiDBLite consensus disorder prediction 321 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0755 Sto-Chr12 4720657 4722940 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0755 K16903 - gmx:100807013 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1381 3 10045235 10050452 Sto12g0755 12 4720657 4722940 CCT
Sto12g0755 12 4720657 4722940 Sto12g0755 12 4720657 4722940 ECH