Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0217 ATGATGGATCTGATTTCGGGTCTACCCGACGATGTTGCCTTGGAATGTTTGATTCGGGTCTCCTACGACCAGTTTCCGGTCGTTGCGTCGGTGAGTAAGTGCTGGAAGACGGAGATCGAGATGCCGGAGTTTCGCCGGCGACGGAGAACCACCGGGCATACCCAACGACTCGTCGTGATGGTTCAAGCCCGAGTTGACTCGGAGAAGCGTAGTAGTGATCTGACGACGAAGGGTTCGAATTCGATGAACCCGGTTTACCGTTTGAGTGTATACGAACCGGGTACGGGCCAGTGGAGCGAGTTGCCGCCACCTCCGGGTTTCACCGGCGGGTTACCAATGTTTTGTCAAATAGCAGGTGTCGGGTACGATTTGGTTCTGATGGGCGGGTGGGACCCGGACACGTGGAAATCGTCGAATTCCGTGTTTATCTACAATTTCTTGTCGGCTAAATGGCGACGTGGGGCCGACATGCCGGGTGGGCCCAGGACGTTCTTCGCGTGCGCGTCCGATTCCGAGCGCGTGGTTTACGTAGCGGGTGGGCACGACGACGAGAAGAACGCACTGAGATCCGCGCTGGCGTATGACGTGGCGAGGGACGAGTGGGTCCCACTTCCCGACATGGAAAAAGAGAGGGACGAGTGCAAGGCGATTTTCCACAGTGGAAGCGGGAAGTTCTGTGTCATCGGCGGTTACTGCACGCAAATGCAAGGCCGGTTCGAGAAGAGCGCCGAGGTCTTTGACGTTGCCACGTGGAAGTGGGACCCAGTGGAAGATCAGTTCTTGGGATCCGCCACGTGTCCGAGGACATGCGTGGACGGTGGCGATGATAGCGATGGCGGGAGATTTTACATGTGCAGGGGTGGTGACGTGGTGGTGTTACAAGGCTCCACGTGGCAGGAGATAGCCAAAGTGCCTAGTGAAATACGGGAGGTGGCATATGTGAGAGCGTGGGAGGGGACGCTCCTGTTGATTGGATCAAGTGGGTTTGCTGAACCATGCATGGGCTTTTTGTTGGATCTTAAGAGTAACTCTTGGACAAAGTTGGAAAGCCCAATGGGCTTCACGGGCTGCGTTCAATCCGGCTGCCTCTTAGAAATTTAG 1101 0.5604 MMDLISGLPDDVALECLIRVSYDQFPVVASVSKCWKTEIEMPEFRRRRRTTGHTQRLVVMVQARVDSEKRSSDLTTKGSNSMNPVYRLSVYEPGTGQWSELPPPPGFTGGLPMFCQIAGVGYDLVLMGGWDPDTWKSSNSVFIYNFLSAKWRRGADMPGGPRTFFACASDSERVVYVAGGHDDEKNALRSALAYDVARDEWVPLPDMEKERDECKAIFHSGSGKFCVIGGYCTQMQGRFEKSAEVFDVATWKWDPVEDQFLGSATCPRTCVDGGDDSDGGRFYMCRGGDVVVLQGSTWQEIAKVPSEIREVAYVRAWEGTLLLIGSSGFAEPCMGFLLDLKSNSWTKLESPMGFTGCVQSGCLLEI 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0217 366 Pfam Kelch motif 174 207 IPR006652 GO:0005515
Sto1g0217 366 Gene3D - 60 359 IPR015915 GO:0005515
Sto1g0217 366 Pfam Kelch motif 112 162 - -
Sto1g0217 366 SUPERFAMILY F-box domain 2 56 IPR036047 GO:0005515
Sto1g0217 366 PANTHER OS02G0208700 PROTEIN 2 366 IPR044595 GO:0080037|GO:2000762
Sto1g0217 366 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 2 366 - -
Sto1g0217 366 SUPERFAMILY Kelch motif 83 351 IPR015915 GO:0005515
Sto1g0217 366 SMART kelc_smart 123 171 IPR006652 GO:0005515
Sto1g0217 366 SMART kelc_smart 174 221 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0217 Sto-Chr1 1627037 1628137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0217 8 201 Miscellaneous Gene Families AT4G33900 26.794 2.35e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0217 - - gmx:100786398 532.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0357 9 3399214 3400293 Sto1g0217 1 1627037 1628137 CCT
Sto1g0217 1 1627037 1628137 Sto1g0217 1 1627037 1628137 ECH